RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 COL19A1Q14993 1142 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF343Q6P1L6 599 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 TMPRSS7Q7RTY8 843 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 PPP1R32Q7Z5V6 425 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 M1APQ8TC57 530 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 HIST1H2BAQ96A08 127 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SIGLEC12Q96PQ1 595 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 IGSF23A1L1A6 192 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 H0YL77 283 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 BMP5P22003 454 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 CRYGSP22914 178 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 APLNRP35414 380 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 LILRB2Q8N423 598 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SPIN2AQ99865 258 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SPIN2BQ9BPZ2 258 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 FZR1Q9UM11 496 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF716A6NP11 495 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 NUDT19A8MXV4 375 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 H7C1Q1 480 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 LILRA1O75019 489 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 SNCAP37840 140 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 P2RY1P47900 373 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 OR10J5Q8NHC4 309 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 hCG_38984A0A1B0GV85 526 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 CD300LBA8K4G0 201 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 CTSSP25774 331 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 B4GALT7Q9UBV7 327 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 DEGS1O15121 323 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 DTYMKP23919 212 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 TESK1Q15569 626 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 ZNF239Q16600 458 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 MPV17LQ2QL34 196 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 ATP1A1-AS1Q5TC04 95 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 GGNQ86UU5 652 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 STX12Q86Y82 276 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 TMEM252Q8N6L7 170 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 MSI2Q96DH6 328 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 ATPIF1Q9UII2 106 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 TMED3Q9Y3Q3 217 aa10.89□□□□□ -0.67
PPP4R1-202ENST00000400555 COLCA2A8K830 154 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 PROB1E7EW31 1015 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ETV2O00321 342 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 YIF1AO95070 293 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 CER1O95813 267 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ZNF266Q14584 549 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 MOB3AQ96BX8 217 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 SLC25A31Q9H0C2 315 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 PLK3Q9H4B4 646 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 SOX15O60248 233 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 RHBDL1O75783 438 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 TFF1P04155 84 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 PSG2P11465 335 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 OTX1P32242 354 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 OR1C1Q15619 314 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ZNF528Q3MIS6 628 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 CNEP1R1Q8N9A8 125 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 MTCH1Q9NZJ7 389 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ABCA1O95477 2261 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 DANCRP0C864 163 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 PLA2G5P39877 138 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 HOXA1P49639 335 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 CEBPDP49716 269 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ARG2P78540 354 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 TMEM164Q5U3C3 297 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 HIST2H3AQ71DI3 136 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 SF3B5Q9BWJ5 86 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 HEATR1Q9H583 2144 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 ZDHHC8Q9ULC8 765 aa10.88□□□□□ -0.67
PPP4R1-202ENST00000400555 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 IL15RAQ13261 267 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 CLN3Q13286 438 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 HABP2Q14520 560 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 RFESDQ8TAC1 157 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 OR1A1Q9P1Q5 309 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 LRRC3CA6NJW4 275 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 CEACAM18A8MTB9 384 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 TRDCB7Z8K6 153 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 RAB2AP61019 212 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 CYB561D1Q8N8Q1 229 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 CDX2Q99626 313 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 TUBD1Q9UJT1 453 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 PIEZO2Q9H5I5 2752 aa10.87□□□□□ -0.67
PPP4R1-202ENST00000400555 PRSS44E7EML9 344 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms