RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ZFPL1O95159 310 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 BCL2P10415 239 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 DEFA4P12838 97 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 UBE2NP61088 152 aaKnown RBP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 NR0B2Q15466 257 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 DEFB115Q30KQ5 88 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 C19orf48Q6RUI8 117 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 LINC00346Q8IVM7 164 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 TTC9CQ8N5M4 171 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 EDA2RQ9HAV5 297 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 YAE1D1Q9NRH1 226 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 COA3Q9Y2R0 106 aaPredicted RBP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 KCNE3Q9Y6H6 103 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 NUP205Q92621 2012 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 CDK5RAP2Q96SN8 1893 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 H0YL77 283 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 GALR3O60755 368 aaPredicted RBP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 KLK2P20151 261 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 ATP6V0CP27449 155 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 LRRC18Q8N456 261 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 CA10Q9NS85 328 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 SLCO1C1Q9NYB5 712 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 P01737 135 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 TWIST1Q15672 202 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 ACSF3Q4G176 576 aaPredicted RBP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 S1PR3Q99500 378 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 EFSO43281 561 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 GPR3P46089 330 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 DYNLT3P51808 116 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 RPL18Q07020 188 aaKnown RBP8.49□□□□□ -1.05
SMAD9-203ENST00000399275 Q5BKY6 102 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 C1orf140Q5VVS0 124 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 TIMD4Q96H15 378 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 ARID1AO14497 2285 aa8.49□□□□□ -1.05
SMAD9-203ENST00000399275 KBTBD11-OT1A0A1B0GTJ5 212 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 OR52N5Q8NH56 324 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 ST6GALNAC6Q969X2 333 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 APOBEC3BQ9UH17 382 aaKnown RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 HIKESHIQ53FT3 197 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 TIMM23BQ5SRD1 257 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 ZNF774Q6NX45 483 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 BHLHE23Q8NDY6 225 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 WBP2Q969T9 261 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 VDAC3Q9Y277 283 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 KCNMB2Q9Y691 235 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 PRSS37A4D1T9 235 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 J3KRW8 73 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 DUX1O43812 170 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 PVRP15151 417 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 GPR183P32249 361 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 TMEFF1Q8IYR6 380 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 H1FOOQ8IZA3 346 aaPredicted RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 OR4D11Q8NGI4 311 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 SIGLEC11Q96RL6 698 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 CRISPLD2Q9H0B8 497 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 PRDM13Q9H4Q3 707 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 SFXN1Q9H9B4 322 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 TMEM167BQ9NRX6 74 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 WSB2Q9NYS7 404 aaPredicted RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 MCTS1Q9ULC4 181 aaKnown RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 K7ESM1 405 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 ADAM20O43506 726 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 NUBP1P53384 320 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 PCBD1P61457 104 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 RSPO2Q6UXX9 243 aaPredicted RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 OR11H4Q8NGC9 324 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 OR4D9Q8NGE8 314 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 OTOSQ8NHW6 89 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 RAB1CQ92928 201 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 RBKSQ9H477 322 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 RER1O15258 196 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 CD79AP11912 226 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 ZNF137PP52743 207 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 TMPRSS3P57727 454 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 BTG2P78543 158 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 SSBP2P81877 361 aaPredicted RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 EIF3IQ13347 325 aaKnown RBP8.48□□□□□ -1.05
SMAD9-203ENST00000399275 DCAF10Q5QP82 559 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 BCORP1Q8N888 145 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 NT5CQ8TCD5 201 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 LPAR2Q9HBW0 351 aa8.48□□□□□ -1.05
SMAD9-203ENST00000399275 LTBP4Q8N2S1 1624 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 IGSF23A1L1A6 192 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 PRRT4C9JH25 899 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 ANKRD34CP0C6C1 535 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SRIP30626 198 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SLAQ13239 276 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 EIF4EBP2Q13542 120 aaPredicted RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms