RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
COL25A1-201ENST00000399126 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.34
COL25A1-201ENST00000399126 HIST1H2AAQ96QV6 131 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 OCSTAMPQ9BR26 566 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 ZNF107Q9UII5 783 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-201ENST00000399126 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 C14orf144Q96I85 54 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 FN3KRPQ9HA64 309 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 MPC1Q9Y5U8 109 aa12.9□□□□□ -0.34
COL25A1-201ENST00000399126 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 SDCBPO00560 298 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-201ENST00000399126 OR7C1O76099 320 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-201ENST00000399126 FABP6P51161 128 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 UCNP55089 124 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 HOXA4Q00056 320 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-201ENST00000399126 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-201ENST00000399126 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 MBP02144 154 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 AMY2BP19961 511 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 CCKARP32238 428 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 OPRM1P35372 400 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 MECP2P51608 486 aaKnown RBP12.89□□□□□ -0.35
COL25A1-201ENST00000399126 IL24Q13007 206 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 COQ8AQ8NI60 647 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
COL25A1-201ENST00000399126 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 GNG3P63215 75 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 MEF2DQ14814 521 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 MSMPQ1L6U9 139 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 Q6ZPA2 131 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-201ENST00000399126 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 CA10Q9NS85 328 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 CHD3Q12873 2000 aaKnown RBP12.88□□□□□ -0.35
COL25A1-201ENST00000399126 H7C1Q1 480 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 M0R1B8 84 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 PRAF2O60831 178 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 ZNF205O95201 554 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 GMFBP60983 142 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 RAB5BP61020 215 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-201ENST00000399126 ZFP82Q8N141 532 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 WDR89Q96FK6 387 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-201ENST00000399126 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
COL25A1-201ENST00000399126 OR51I2Q9H344 312 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 PLEKHA6Q9Y2H5 1048 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 ZNF835Q9Y2P0 537 aa12.88□□□□□ -0.35
COL25A1-201ENST00000399126 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 HSPB6O14558 160 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 CRYBA1P05813 215 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 C2orf68Q2NKX9 166 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 ZNF626Q68DY1 528 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-201ENST00000399126 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 AMDHD2Q9Y303 409 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
COL25A1-201ENST00000399126 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 IQCF6A8MYZ5 107 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 MLNRO43193 412 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 NAAAQ02083 359 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 Q5PR19 223 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 TIMM23BQ5SRD1 257 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 PDZD9Q8IXQ8 264 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-201ENST00000399126 PRRT1Q99946 306 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 SLC2A8Q9NY64 477 aa12.87□□□□□ -0.35
COL25A1-201ENST00000399126 A0A1B0GW55 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 TRAPPC2LH3BP13 241 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 IFNA6P05013 189 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L2P0CJ85 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L3P0CJ86 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L4P0CJ87 422 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L5P0CJ88 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L6P0CJ89 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4L7P0CJ90 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 FGF12P61328 243 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 TMEM88Q6PEY1 159 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 C5orf24Q7Z6I8 188 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 MSL2Q9HCI7 577 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 DUX4Q9UBX2 424 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 HSF4Q9ULV5 492 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 MEIKINA0A087WXM9 373 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 CREBL2O60519 120 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-201ENST00000399126 PDCD6O75340 191 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 IL5P05113 134 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 ZNF154Q13106 437 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 Q6ZR03 302 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
COL25A1-201ENST00000399126 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms