RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
HLCS-202ENST00000399120 DNAJB12Q9NXW2 375 aaKnown RBP10.26□□□□□ -0.77
HLCS-202ENST00000399120 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 CRYBB2P43320 205 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 SURF2Q15527 256 aaPredicted RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 TMEM196Q5HYL7 178 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 CLEC18BQ6UXF7 455 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 MEGF10Q96KG7 1140 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 OR2V2Q96R30 315 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 TCRBV5S1A1TA0A578 114 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 KCNAB3O43448 404 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 CALHM1Q8IU99 346 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 GAPTQ8N292 157 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 OR8B12Q8NGG6 310 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 MAFAQ8NHW3 353 aaPredicted RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 OIT3Q8WWZ8 545 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 HSF4Q9ULV5 492 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 IGKV3D-15A0A087WSY6 115 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 IGKV3-15P01624 115 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 FAM109BQ6ICB4 259 aaPredicted RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 ZNF738Q8NE65 137 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 PAXXQ9BUH6 204 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 GHITMQ9H3K2 345 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 PRR13Q9NZ81 148 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 TSPAN13O95857 204 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 CD81P60033 236 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 INSL4Q14641 139 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 ADAMTS17Q8TE56 1095 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 METTL26Q96S19 204 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 HIST1H4GQ99525 98 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 MYH13Q9UKX3 1938 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 TRBV5-4A0A0C4DH59 114 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 MPDU1O75352 247 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 GFRA1P56159 465 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 NUDT16L1Q9BRJ7 211 aaKnown RBP10.25□□□□□ -0.77
HLCS-202ENST00000399120 OR2W1Q9Y3N9 320 aa10.25□□□□□ -0.77
HLCS-202ENST00000399120 SDK1Q7Z5N4 2213 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 A0A1B0GTH9 108 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 H3BQ15 152 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 VDAC1P21796 283 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 TFPI2P48307 235 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 RAB9AP51151 201 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 SOX8P57073 446 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 EID2BQ96D98 161 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 C16orf92Q96LL3 132 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 SLC52A3Q9NQ40 469 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 KBTBD11O94819 623 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 ZNF205O95201 554 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 SELENOPP49908 381 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 MMDQ15546 238 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 MEIG1Q5JSS6 88 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 DDB2Q92466 427 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 IGHV3-21A0A0B4J1V1 117 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 C7orf77A4D0Y5 90 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 RBFOX2O43251 390 aaKnown RBP eCLIP10.24□□□□□ -0.77
HLCS-202ENST00000399120 EWSR1Q01844 656 aaKnown RBP eCLIP10.24□□□□□ -0.77
HLCS-202ENST00000399120 HES3Q5TGS1 186 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 NFAM1Q8NET5 270 aaPredicted RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 GABRG2P18507 467 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 NEURL2Q9BR09 285 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 MS4A7Q9GZW8 240 aaPredicted RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 PRSS2P07478 247 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 CDKN2AP42771 156 aaKnown RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 SLIRPQ9GZT3 109 aaKnown RBP10.24□□□□□ -0.77
HLCS-202ENST00000399120 MIOXQ9UGB7 285 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 OR51B2Q9Y5P1 312 aa10.24□□□□□ -0.77
HLCS-202ENST00000399120 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 NUP188Q5SRE5 1749 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 CTXND1A0A1B0GTU2 59 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
HLCS-202ENST00000399120 MPZL1O95297 269 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 FOXB2Q5VYV0 432 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 MRPL30Q8TCC3 161 aaKnown RBP10.23□□□□□ -0.77
HLCS-202ENST00000399120 ASB10Q8WXI3 467 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
HLCS-202ENST00000399120 ARFGEF2Q9Y6D5 1785 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 OR6X1Q8NH79 312 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 NUBPLQ8TB37 319 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 ASB5Q8WWX0 329 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 CCL28Q9NRJ3 127 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 SYNGR1O43759 233 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 EML2O95834 649 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 MMP9P14780 707 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 MPLP40238 635 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 RTN4RL1Q86UN2 441 aaPredicted RBP10.23□□□□□ -0.77
HLCS-202ENST00000399120 OR4D9Q8NGE8 314 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 SPOCK3Q9BQ16 436 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 TNFRSF12AQ9NP84 129 aa10.23□□□□□ -0.77
HLCS-202ENST00000399120 DNAL4O96015 105 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms