RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 COX19Q49B96 90 aa7.59□□□□□ -1.19
CTNND1-205ENST00000399050 D2HGDHQ8N465 521 aa7.59□□□□□ -1.19
CTNND1-205ENST00000399050 TECRQ9NZ01 308 aaKnown RBP7.59□□□□□ -1.19
CTNND1-205ENST00000399050 CACNA1CQ13936 2221 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 TRBV5-5A0A0J9YX44 114 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 CYR61O00622 381 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 CELA2BP08218 269 aaPredicted RBP7.59□□□□□ -1.2
CTNND1-205ENST00000399050 UBE2L3P68036 154 aaKnown RBP7.59□□□□□ -1.2
CTNND1-205ENST00000399050 RUNX1Q01196 453 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 VMA21Q3ZAQ7 101 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 TMEM240Q5SV17 173 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 OR4F17Q8NGA8 305 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 R3HDM4Q96D70 268 aa7.59□□□□□ -1.2
CTNND1-205ENST00000399050 ZNF785A8K8V0 405 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SPINK2P20155 84 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 GALNSP34059 522 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 PAFAH1B2P68402 229 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 VAX1Q5SQQ9 334 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 TMEM211Q6ICI0 200 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 RNF133Q8WVZ7 376 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HIST1H2BAQ96A08 127 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SLC7A10Q9NS82 523 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 GABRG2P18507 467 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SPATA45Q537H7 98 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 MOB3BQ86TA1 216 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SFTPA1Q8IWL2 248 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SSMEM1Q8WWF3 244 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 MOB3AQ96BX8 217 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 LMO7DNF2Z398 122 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 C1QL1O75973 258 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HOXC4P09017 264 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-205ENST00000399050 DRD3P35462 400 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 G6PCP35575 357 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 CDX1P47902 265 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-205ENST00000399050 LSM6P62312 80 aaKnown RBP7.58□□□□□ -1.2
CTNND1-205ENST00000399050 Q56UQ5 140 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 MCM3APO60318 1980 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 CXorf1O96002 111 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 ZNF260Q3ZCT1 412 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 LAMTOR1Q6IAA8 161 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 OR1B1Q8NGR6 318 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HSPB9Q9BQS6 159 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 DDA1Q9BW61 102 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-205ENST00000399050 A6NDN8 102 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HELTA6NFD8 242 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 LINC01565O15544 149 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 IGHV3-7P01780 117 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HSPB1P04792 205 aaKnown RBP7.58□□□□□ -1.2
CTNND1-205ENST00000399050 SMIM17P0DL12 118 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 ZP1P60852 638 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 OR4A47Q6IF82 309 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 PDPNQ86YL7 162 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 OR10D3Q8NH80 312 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 HSPB8Q9UJY1 196 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
CTNND1-205ENST00000399050 OR5B21A6NL26 309 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 ORM2P19652 201 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 FSTP19883 344 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 FCARP24071 287 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 CTGFP29279 349 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 PMELP40967 661 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 CSRP3P50461 194 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 FUT5Q11128 374 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 COL19A1Q14993 1142 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 AQP10Q96PS8 301 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 PCGF1Q9BSM1 259 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 TMEM204Q9BSN7 226 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 PRRC2BQ5JSZ5 2229 aaKnown RBP7.57□□□□□ -1.2
CTNND1-205ENST00000399050 IGKV1D-16P01601 117 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 FAM157CP0CG43 387 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 PEBP1P30086 187 aaKnown RBP7.57□□□□□ -1.2
CTNND1-205ENST00000399050 MMP16P51512 607 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 EIF3IQ13347 325 aaKnown RBP7.57□□□□□ -1.2
CTNND1-205ENST00000399050 EIF4EBP2Q13542 120 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-205ENST00000399050 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
CTNND1-205ENST00000399050 RPL36A-HNRNPH2H7BZ11 118 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 ACTL6AO96019 429 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 PNLIPP16233 465 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 HLA-BQ31612 363 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 BPIFA4PQ86YQ2 179 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 RNF2Q99496 336 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 H0YL77 283 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 MPLP40238 635 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 WFDC8Q8IUA0 241 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 AQP3Q92482 292 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 OR2W1Q9Y3N9 320 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 LOXL2Q9Y4K0 774 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 OOEPA6NGQ2 149 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 FCGR3AP08637 254 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 OR1C1Q15619 314 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 REC114Q7Z4M0 266 aa7.57□□□□□ -1.2
CTNND1-205ENST00000399050 SMIM12Q96EX1 92 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms