RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ABCA7Q8IZY2 2146 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 FOXI3A8MTJ6 420 aaPredicted RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 OR4A8P0C604 315 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 METTL15P1P0C7V9 234 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 ECI1P42126 302 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 BLKP51451 505 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF133P52736 654 aaPredicted RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 GRB2P62993 217 aaKnown RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 SLC25A47Q6Q0C1 308 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 GAPTQ8N292 157 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 PRR18Q8N4B5 295 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 OR4D5Q8NGN0 318 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 ELOVL1Q9BW60 279 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 TWSG1Q9GZX9 223 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 MS4A5Q9H3V2 200 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 TLX3O43711 291 aaPredicted RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 IFNA5P01569 189 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 RPL29P47914 159 aaKnown RBP8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 SPCS3P61009 180 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF100Q8IYN0 542 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 CCDC71LQ8N9Z2 235 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 GJC3Q8NFK1 279 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 OR1K1Q8NGR3 316 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 PCGF1Q9BSM1 259 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 IL17BQ9UHF5 180 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 HS3ST3A1Q9Y663 406 aa8.52□□□□□ -1.05
PTCHD4-202ENST00000398738 IGKV1-12A0A0C4DH73 117 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A1B0GUS0 222 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 A8MWP6 167 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 IGKV1D-12P01611 117 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 MAS1LP35410 378 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 NPBWR2P48146 333 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 TM4SF20Q53R12 229 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF506Q5JVG8 444 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 RTL6Q6ICC9 239 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 OR10A7Q8NGE5 316 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 POC1BQ8TC44 478 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SCGB1C1Q8TD33 95 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SMIM7Q9BQ49 75 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 CCL28Q9NRJ3 127 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A087WWC5 75 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF891A8MT65 544 aaPredicted RBP8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 TRDCB7Z8K6 153 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 BCAT2O15382 392 aaPredicted RBP8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SCTP09683 121 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 MSR1P21757 451 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 MALLQ13021 153 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 RSPO1Q2MKA7 263 aaPredicted RBP8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF774Q6NX45 483 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SLC35E3Q7Z769 313 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 FAM185AQ8N0U4 392 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 TM2D1Q9BX74 207 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 SIRT7Q9NRC8 400 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 FGF21Q9NSA1 209 aa8.51□□□□□ -1.05
PTCHD4-202ENST00000398738 TRAV39A0A0B4J263 110 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 A6NNC1 897 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PITX3O75364 302 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 TIAF1O95411 115 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 IGHV3-9P01782 118 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 FOSL2P15408 326 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 COL8A1P27658 744 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 GALNSP34059 522 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 H3F3AP84243 136 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 FAM90A2PQ658T7 463 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF705AQ6ZN79 300 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF818PQ6ZRF7 136 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 C16orf82Q7Z2V1 217 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 OSR2Q8N2R0 312 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PHOSPHO2Q8TCD6 241 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 IL1F10Q8WWZ1 152 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PP6455Q8WZ26 134 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CACNA1DQ01668 2161 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF705FA8MVS1 300 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 RRP8O43159 456 aaKnown RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 POU2F2P09086 479 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF705DP0CH99 300 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF705BP0CI00 300 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 SLC10A1Q14973 349 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PLCXD3Q63HM9 321 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 OR1P1Q8NH06 330 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 SSC4DQ8WTU2 575 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 FAM131CQ96AQ9 280 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 GNPNAT1Q96EK6 184 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 RBKSQ9H477 322 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A1B0GU03 582 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 LOC102723971A0A1B0GUV8 181 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PPP5D1E7EU14 171 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms