RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 Q8WTZ3 238 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 SH2D2AQ9NP31 389 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 SLC7A10Q9NS82 523 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 GDF9O60383 454 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 SMPD2O60906 423 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 PRDX2P32119 198 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 MUC20Q8N307 709 aaPredicted RBP9.92□□□□□ -0.82
TTC28-201ENST00000397906 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 FCARP24071 287 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 MGAT2Q10469 447 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 RNF122Q9H9V4 155 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 TMEM210A6NLX4 147 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 FABP4P15090 132 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 WASHC3Q9Y3C0 194 aa9.92□□□□□ -0.82
TTC28-201ENST00000397906 TMPRSS5Q9H3S3 457 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 RHOFQ9HBH0 211 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ARPC4-TTLL3A0A0A6YYG9 625 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 PRDM14Q9GZV8 571 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 CES1P1Q9UKY3 287 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 LY75O60449 1722 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 MAP1LC3B2A6NCE7 125 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 OR4P4Q8NGL7 312 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 MAP1LC3BQ9GZQ8 125 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 SIRT7Q9NRC8 400 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 PIPOXQ9P0Z9 390 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 CTSBP07858 339 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ADRB1P08588 477 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 GALR1P47211 349 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 PLAURQ03405 335 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ZNF658BQ4V348 819 aaPredicted RBP9.91□□□□□ -0.82
TTC28-201ENST00000397906 LSMEM1Q8N8F7 131 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 NOL4LQ96MY1 436 aaPredicted RBP9.91□□□□□ -0.82
TTC28-201ENST00000397906 PLAC1Q9HBJ0 212 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ANXA10Q9UJ72 324 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 A0A1W2PPC1 479 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 PF4P02776 101 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 CTSSP25774 331 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 SUMO1P63165 101 aaKnown RBP9.91□□□□□ -0.82
TTC28-201ENST00000397906 ZNF154Q13106 437 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ZDHHC22Q8N966 263 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 DUSP18Q8NEJ0 188 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 PCM1Q15154 2024 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 CACNA1CQ13936 2221 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 IGKV3D-15A0A087WSY6 115 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 IGKV3-15P01624 115 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 GZMHP20718 246 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 KLRB1Q12918 225 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ZPLD1Q8TCW7 415 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ITLN1Q8WWA0 313 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 ZNF826PQ6ZT77 177 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 WNT5AP41221 380 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 HDHD3Q9BSH5 251 aaPredicted RBP9.91□□□□□ -0.82
TTC28-201ENST00000397906 SLC52A3Q9NQ40 469 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 SYNGR1O43759 233 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 DCTN5Q9BTE1 182 aa9.91□□□□□ -0.82
TTC28-201ENST00000397906 RPL13AP40429 203 aaKnown RBP9.9□□□□□ -0.82
TTC28-201ENST00000397906 RPEL1Q2QD12 228 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 MRGPRFQ96AM1 343 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 GSX2Q9BZM3 304 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 FFAR1O14842 300 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 GSTZ1O43708 216 aaPredicted RBP9.9□□□□□ -0.82
TTC28-201ENST00000397906 OR4X1Q8NH49 305 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 ATP5SQ99766 215 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 SLC17A5Q9NRA2 495 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 MVDP53602 400 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 ERVFRD-1P60508 538 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 C10orf113Q5VZT2 155 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 NDUFB6O95139 128 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 PSG2P11465 335 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 TEX30Q5JUR7 227 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 CCDC144NLQ6NUI1 221 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 DOLPP1Q86YN1 238 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 FDCSPQ8NFU4 85 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 A0A1W2PQM1 296 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 ADAP1O75689 374 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 RPL30P62888 115 aaKnown RBP9.9□□□□□ -0.82
TTC28-201ENST00000397906 PSG5Q15238 335 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 MRGPRGQ86SM5 289 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 DTD1Q8TEA8 209 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 A0A1W2PNV4 684 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 J3QT63 122 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 SSX1Q16384 188 aa9.9□□□□□ -0.82
TTC28-201ENST00000397906 PRSS3P2Q8NHM4 247 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 ID1P41134 155 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 SLC35B1P78383 322 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 PSG4Q00888 419 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 RNF165Q6ZSG1 346 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 COMMD1Q8N668 190 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 STARD4Q96DR4 205 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 MS4A10Q96PG2 267 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 RAXQ9Y2V3 346 aa9.9□□□□□ -0.83
TTC28-201ENST00000397906 S100A8P05109 93 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 CSN3P07498 182 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms