RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM211Q6ICI0 200 aa15.75■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ERGIC1Q969X5 290 aa15.75■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ZNF552Q9H707 407 aaPredicted RBP15.75■□□□□ 0.11
CHRFAM7A-202ENST00000397827 RPL36A-HNRNPH2H7BZ11 118 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MT-CO3P00414 261 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 OR52M1Q8NGK5 317 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 BSCL2Q96G97 398 aaPredicted RBP15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 C12orf49Q9H741 205 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PLA2G2EQ9NZK7 142 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 LIPGQ9Y5X9 500 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 KMT2EQ8IZD2 1858 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 A0A1W2PPH5 198 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ZNF732B4DXR9 585 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 TAAR5O14804 337 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MED6O75586 246 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 LPAR6P43657 344 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 HERV-K104P61576 105 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ATP1A1-AS1Q5TC04 95 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MEX3BQ6ZN04 569 aaKnown RBP15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 LIAT1Q6ZQX7 453 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MSI2Q96DH6 328 aaKnown RBP15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 RHOFQ9HBH0 211 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MTCH1Q9NZJ7 389 aa15.74■□□□□ 0.11
CHRFAM7A-202ENST00000397827 A0A087X0M5 115 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 A0A1B0GX30 115 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PPYP01298 95 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 RAB5AP20339 215 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 DDTP30046 118 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ID4P47928 161 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MEOX1P50221 254 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ZDHHC23Q8IYP9 409 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 TP53RKQ96S44 253 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 GPHA2Q96T91 129 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PRSS50Q9UI38 385 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 CBY1Q9Y3M2 126 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 S100A2P29034 98 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 APOBEC3DQ96AK3 386 aaPredicted RBP15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PARP12Q9H0J9 701 aaKnown RBP15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PRO1933Q9H354 126 aa15.73■□□□□ 0.11
CHRFAM7A-202ENST00000397827 LILRA1O75019 489 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 TNFSF15O95150 251 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 CST4P01036 141 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 CEACAM21Q3KPI0 293 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 TMEM268Q5VZI3 342 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 VASH2Q86V25 355 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SMIM8Q96KF7 97 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 C18orf12Q96KH6 178 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SYT3Q9BQG1 590 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SUCNR1Q9BXA5 334 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 WASF3Q9UPY6 502 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 NUDT19A8MXV4 375 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 M0R296 226 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 AGPAT2O15120 278 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SYNGR1O43759 233 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SP1P08047 785 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 HIKESHIQ53FT3 197 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 POM121L2Q96KW2 1035 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 DEFB127Q9H1M4 99 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 R4GN57 208 aa15.72■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SCTP09683 121 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 EIF5AP63241 154 aaKnown RBP15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 IGFBP7Q16270 282 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 MCEMP1Q8IX19 187 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 NEK7Q8TDX7 302 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ZNF488Q96MN9 340 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PCNX2A6NKB5 2137 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 IFITM10A6NMD0 228 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 RNASEK-C17orf49H0YIS7 233 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 FGF12P61328 243 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 USF2Q15853 346 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 IL34Q6ZMJ4 242 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 LGI3Q8N145 548 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 SLC35G3Q8N808 338 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 Q8NFD4 153 aa15.71■□□□□ 0.11
CHRFAM7A-202ENST00000397827 ZNF724A8MTY0 619 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 H7C1Q1 480 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SNRNP70P08621 437 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 DAOP14920 347 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HIST1H1BP16401 226 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 UCP3P55916 312 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RAB4BP61018 213 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PLA2G2CQ5R387 149 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 EIF5AL1Q6IS14 154 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FBXW12Q6X9E4 464 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 LRTM2Q8N967 370 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C2orf88Q9BSF0 95 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ARHGAP21Q5T5U3 1957 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ESPL1Q14674 2120 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 JTBO76095 146 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GNRHRP30968 328 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SPIN3Q5JUX0 258 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HES3Q5TGS1 186 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IL22RA1Q8N6P7 574 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SECTM1Q8WVN6 248 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SAT2Q96F10 170 aaPredicted RBP15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CFAP47Q6ZTR5 3102 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CD300LBA8K4G0 201 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 E5RGE8 158 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM24BQ8N5W8 94 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms