RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MINOS1-NBL1R4GNA1 71 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 HUWE1Q7Z6Z7 4374 aaKnown RBP12.83□□□□□ -0.35
CUX2-202ENST00000397643 EPPK1P58107 5090 aaKnown RBP12.83□□□□□ -0.36
CUX2-202ENST00000397643 MAGEB3O15480 346 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 SULT1B1O43704 296 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 GPX5O75715 221 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 NXPH2O95156 264 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 UCHL1P09936 223 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 FSTP19883 344 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 GADD45AP24522 165 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 HAAOP46952 286 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 FUT6P51993 359 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
CUX2-202ENST00000397643 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
CUX2-202ENST00000397643 MRPL41Q8IXM3 137 aaKnown RBP12.83□□□□□ -0.36
CUX2-202ENST00000397643 DNAAF1Q8NEP3 725 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 EXOSC4Q9NPD3 245 aaKnown RBP12.83□□□□□ -0.36
CUX2-202ENST00000397643 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 GSTK1Q9Y2Q3 226 aa12.83□□□□□ -0.36
CUX2-202ENST00000397643 FAM230AA0A1W2PPH8 454 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 AMY1AP04745 511 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 AMY2AP04746 511 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 LPLP06858 475 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 MPZP25189 248 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 OR4X2Q8NGF9 303 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 BORCS8Q96FH0 119 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 CHCHD6Q9BRQ6 235 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 TENM2Q9NT68 2774 aa12.82□□□□□ -0.36
CUX2-202ENST00000397643 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 IGKV1-9A0A0C4DH69 117 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 PQLC2LA1A4F0 135 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 HCKP08631 526 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
CUX2-202ENST00000397643 SRMP19623 302 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 CD24P25063 80 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 BDKRB2P30411 391 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 FGF9P31371 208 aaPredicted RBP12.81□□□□□ -0.36
CUX2-202ENST00000397643 RBP2P50120 134 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 ATP1B3P54709 279 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 FAM27D1Q5T7N8 215 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 C22orf42Q6IC83 251 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 RNF144BQ7Z419 303 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 ZNF573Q86YE8 665 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
CUX2-202ENST00000397643 ORAI1Q96D31 301 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 CPNE2Q96FN4 548 aaPredicted RBP12.81□□□□□ -0.36
CUX2-202ENST00000397643 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 FUNDC2Q9BWH2 189 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 LIN7BQ9HAP6 207 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 TMEM138Q9NPI0 162 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 POLDIP2Q9Y2S7 368 aa12.81□□□□□ -0.36
CUX2-202ENST00000397643 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 LOC100506127A0A0U1RQW1 187 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 SH2D7A6NKC9 451 aaPredicted RBP12.8□□□□□ -0.36
CUX2-202ENST00000397643 AIREO43918 545 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 MYL9P24844 172 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 CALRP27797 417 aaKnown RBP12.8□□□□□ -0.36
CUX2-202ENST00000397643 MTCP1P56278 107 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 EDDM3BP56851 147 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 ABCA11PQ4W5N1 156 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 KHDC1LQ5JSQ8 128 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 NKAPLQ5M9Q1 402 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 OR8H2Q8N162 312 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 ASCC1Q8N9N2 400 aaKnown RBP12.8□□□□□ -0.36
CUX2-202ENST00000397643 OR51A2Q8NGJ7 313 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 DPF1Q92782 380 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
CUX2-202ENST00000397643 TXNL4BQ9NX01 149 aaKnown RBP12.8□□□□□ -0.36
CUX2-202ENST00000397643 SESN1Q9Y6P5 492 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 U3KQK5 164 aa12.8□□□□□ -0.36
CUX2-202ENST00000397643 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 TRAV1-2A0A0B4J238 106 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 TMEM82A0PJX8 343 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 F8VVB4 439 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 F8VWA3 439 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 MAS1P04201 325 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 CHRM2P08172 466 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 NHLRC4P0CG21 123 aaPredicted RBP12.79□□□□□ -0.36
CUX2-202ENST00000397643 THBS3P49746 956 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 DCTN2Q13561 401 aaKnown RBP12.79□□□□□ -0.36
CUX2-202ENST00000397643 DDI2Q5TDH0 399 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 GPR107Q5VW38 600 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 ANKRD13BQ86YJ7 626 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 CLEC7AQ9BXN2 247 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 TMEM133Q9H2Q1 129 aa12.79□□□□□ -0.36
CUX2-202ENST00000397643 PDCD5O14737 125 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 MMP23AO75900 390 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 OR2F2O95006 317 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 HTR1DP28221 377 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms