RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MMP7P09237 267 aaPredicted RBP8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 GABRA2P47869 451 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 HIST1H3AP68431 136 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 RUNX1Q01196 453 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 TMEM187Q14656 261 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 HIST2H3PS2Q5TEC6 136 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 CRIP3Q6Q6R5 217 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 HIST2H3AQ71DI3 136 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 LDLRAD3Q86YD5 345 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR5C1Q8NGR4 320 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 HPSE2Q8WWQ2 592 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 PRO3102Q9H379 93 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 MSL2Q9HCI7 577 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 KCNJ16Q9NPI9 418 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 MMP26Q9NRE1 261 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 OTOGLQ3ZCN5 2332 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 IGHV3-43A0A0B4J1X8 118 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 IGKV1D-13A0A0B4J2D9 117 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 IGHV3-43DP0DP04 118 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 IGKV1-13P0DP09 117 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 CD37P11049 281 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 CD59P13987 128 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 GNG3P63215 75 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 ZNF573Q86YE8 665 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 TMEM178AQ8NBL3 297 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 GPR87Q9BY21 358 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 RPL36A-HNRNPH2H7BZ11 118 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 MSTNO14793 375 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 RPS2P15880 293 aaKnown RBP8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 IL2RGP31785 369 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR8G1Q15617 311 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 SPINK9Q5DT21 86 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR8G2PQ6IF36 304 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 CLRN3Q8NCR9 226 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 WBP1Q96G27 269 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 AQP10Q96PS8 301 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 MPZP25189 248 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 CEACAM21Q3KPI0 293 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 AKR1C8PQ5T2L2 129 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 CCDC54Q8NEL0 328 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR4A4PQ8NGN8 299 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR1K1Q8NGR3 316 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 NINJ1Q92982 152 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 SPIN2AQ99865 258 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 SPIN2BQ9BPZ2 258 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 DNAJB11Q9UBS4 358 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
CPSF1P1-201ENST00000397477 PROB1E7EW31 1015 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 TAAR5O14804 337 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 CHST1O43916 411 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 ZNF154Q13106 437 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 RNFT1Q5M7Z0 435 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR2C3Q8N628 320 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 PLEKHA2Q9HB19 425 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 ZNF391Q9UJN7 358 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 HSF4Q9ULV5 492 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 HMGB3O15347 200 aaKnown RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 F2RL1P55085 397 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 SPANXN5Q5MJ07 72 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 GPR157Q5UAW9 335 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 FBXW9Q5XUX1 488 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 TMEM211Q6ICI0 200 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 LILRB2Q8N423 598 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR10V1Q8NGI7 309 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 C1QTNF5Q9BXJ0 243 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 CEP295Q9C0D2 2601 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 C21orf140B9A014 251 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 CDX4O14627 284 aaPredicted RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 GPR137BO60478 399 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 WISP2O76076 250 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 KRASP01116 189 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 PSG2P11465 335 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 TDGF1P13385 188 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 ALDH3B1P43353 468 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 ELLP55199 621 aaPredicted RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 ZNF816Q0VGE8 651 aaPredicted RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 RNPS1Q15287 305 aaKnown RBP8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 OR8B8Q15620 311 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 THNSL2Q86YJ6 484 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 SLC25A40Q8TBP6 338 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 MOB3AQ96BX8 217 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 TREM2Q9NZC2 230 aa8.94□□□□□ -0.98
CPSF1P1-201ENST00000397477 RAB19A4D1S5 217 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 FGF12P61328 243 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 PPP1CBP62140 327 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 GUK1Q16774 197 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 FOXL2NBQ6ZUU3 175 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 SCGB1C1Q8TD33 95 aa8.93□□□□□ -0.98
CPSF1P1-201ENST00000397477 SSC4DQ8WTU2 575 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms