RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 POU3F4P49335 361 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 CEBPDP49716 269 aaPredicted RBP11.95□□□□□ -0.5
SEC13-208ENST00000397109 FOXL1Q12952 345 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 PDZK1IP1Q13113 114 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 HES5Q5TA89 166 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 CRIP3Q6Q6R5 217 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 ZNF554Q86TJ5 538 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 BATF2Q8N1L9 274 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 OR51A2Q8NGJ7 313 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 EMG1Q92979 244 aaKnown RBP11.95□□□□□ -0.5
SEC13-208ENST00000397109 ORAI1Q96D31 301 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 ABHD1Q96SE0 405 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 FAM96BQ9Y3D0 163 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 ANK2Q01484 3957 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 hCG_1809904A0A1W2PP81 198 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 A0A1W2PPE2 198 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 A0A1W2PR64 198 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 A0A1W2PRV1 198 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 CENPXA8MT69 81 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 K7N7A8 449 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 HAX1O00165 279 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 PLA2G10O15496 165 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
SEC13-208ENST00000397109 BDKRB2P30411 391 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 COL10A1Q03692 680 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 DYRK1AQ13627 763 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 FAM189A2Q15884 450 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 RAB11BQ15907 218 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 NRARPQ7Z6K4 114 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 FAM58AQ8N1B3 248 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
SEC13-208ENST00000397109 SSMEM1Q8WWF3 244 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 TNFRSF14Q92956 283 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
SEC13-208ENST00000397109 RHOFQ9HBH0 211 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 GLS2Q9UI32 602 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 POMT1Q9Y6A1 747 aa11.94□□□□□ -0.5
SEC13-208ENST00000397109 F8VVB4 439 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 F8VWA3 439 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 GABARAPH6UMI1 98 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 LYRM1O43325 122 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 XRCC3O43542 346 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 SCGNO76038 276 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 MELTFP08582 738 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 HTR2CP28335 458 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 RFX2P48378 723 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 UBE2E1P51965 193 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 AP3S2P59780 193 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 SAXO1Q8IYX7 474 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 SMIM4Q8WVI0 70 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 FAM3DQ96BQ1 224 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 SNX22Q96L94 193 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 C19orf12Q9NSK7 152 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 RHBDL2Q9NX52 303 aa11.93□□□□□ -0.5
SEC13-208ENST00000397109 A0A0U1RQK1 487 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 NPFFO15130 113 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 ZNF737O75373 536 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 HAND1O96004 215 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 HCKP08631 526 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 FBP1P09467 338 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 RAB6AP20340 208 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 BCL3P20749 454 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 NPBWR2P48146 333 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
SEC13-208ENST00000397109 ZNF146Q15072 292 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 KISS1Q15726 138 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 C2orf76Q3KRA6 126 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 AWAT1Q58HT5 328 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 ZSCAN4Q8NAM6 433 aaPredicted RBP11.92□□□□□ -0.5
SEC13-208ENST00000397109 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 PPP1R35Q8TAP8 253 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 SLC25A38Q96DW6 304 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 C11orf54Q9H0W9 315 aaPredicted RBP11.92□□□□□ -0.5
SEC13-208ENST00000397109 HEXA-AS1Q9H8Q6 139 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 FBLN5Q9UBX5 448 aa11.92□□□□□ -0.5
SEC13-208ENST00000397109 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
SEC13-208ENST00000397109 CRYBA1P05813 215 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 GSTT2BP0CG30 244 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 ARSBP15848 533 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 PRKACAP17612 351 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 ZP1P60852 638 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 KLRD1Q13241 179 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 ZNF57Q68EA5 555 aaPredicted RBP11.91□□□□□ -0.5
SEC13-208ENST00000397109 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 CADM3Q8N126 398 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 TOMM5Q8N4H5 51 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 PHF21AQ96BD5 680 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms