RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 IGKV1-27A0A075B6S5 117 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF705FA8MVS1 300 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 SIRPB1O00241 398 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF705DP0CH99 300 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF705BP0CI00 300 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ERVFRD-1P60508 538 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 LSM6P62312 80 aaKnown RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 OIT3Q8WWZ8 545 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 FAM234AQ9H0X4 552 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 SLC25A22Q9H936 323 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 SCGB1D1O95968 90 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF66Q6ZN08 573 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF818PQ6ZRF7 136 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 FAM89BQ8N5H3 189 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 IGKV1-12A0A0C4DH73 117 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 LOC102725191A0A1B0GVB3 256 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 IGKV1D-12P01611 117 aa12.72□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 TMEM171Q8WVE6 324 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 LURAP1Q96LR2 239 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 C12orf49Q9H741 205 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 PSENENQ9NZ42 101 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 TUBD1Q9UJT1 453 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 NOSIPQ9Y314 301 aaKnown RBP12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 A0A1W2PNV4 684 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 BTBD17A6NE02 478 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 TRDCB7Z8K6 153 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 CDX1P47902 265 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 FUT6P51993 359 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 UBE2G2P60604 165 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 CLN3Q13286 438 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 RABEPKQ7Z6M1 372 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 ZNF709Q8N972 641 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 OR4F5Q8NH21 305 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
RAPGEF4-201ENST00000397081 KRASP01116 189 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 SRPXP78539 464 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 GINS3Q9BRX5 216 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 POLEQ07864 2286 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 H7BYZ3 331 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 VAMP5O95183 116 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 PSG4Q00888 419 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 PLP2Q04941 152 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 GPR27Q9NS67 375 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 FREM1Q5H8C1 2179 aa12.71□□□□□ -0.38
RAPGEF4-201ENST00000397081 OR5H1A6NKK0 313 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 PPP5D1E7EU14 171 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CLDN34H7C241 214 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 PSG2P11465 335 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CCL4P13236 92 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 KHDC3LQ587J8 217 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CYB5R2Q6BCY4 276 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 EDARADDQ8WWZ3 215 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 GLRX2Q9NS18 164 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 PLA2G3Q9NZ20 509 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 A0A0U1RQV5 110 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 A0A1W2PR77 199 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 SEC14L6B5MCN3 397 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 IFNA1P01562 189 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CLDN15P56746 228 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 BAXQ07812 192 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CCDC54Q8NEL0 328 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 SRXN1Q9BYN0 137 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 RAB35Q15286 201 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 SPEM1Q8N4L4 309 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 SMOC1Q9H4F8 434 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 FBLN5Q9UBX5 448 aa12.7□□□□□ -0.38
RAPGEF4-201ENST00000397081 CHRNA7P36544 502 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 HGFACQ04756 655 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 NCR3LG1Q68D85 454 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 CPT1CQ8TCG5 803 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 KIAA1456Q9P272 454 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 LAMTOR5O43504 91 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
RAPGEF4-201ENST00000397081 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms