RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TFF1P04155 84 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 AMY2BP19961 511 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 CDK2P24941 298 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 NPBWR2P48146 333 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 NPY4RP50391 375 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 CD276Q5ZPR3 534 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 WDR82Q6UXN9 313 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 C17orf107Q6ZR85 190 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 POC1AQ8NBT0 407 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 Q8NFD4 153 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 OR4F5Q8NH21 305 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 LINC01006Q8NI28 216 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 EMG1Q92979 244 aaKnown RBP8.48□□□□□ -1.05
NEDD8-202ENST00000396828 TM2D1Q9BX74 207 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 LPAR5Q9H1C0 372 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 RASL12Q9NYN1 266 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 DNAJB11Q9UBS4 358 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 GLS2Q9UI32 602 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 ST3GAL6Q9Y274 331 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 V9GYH0 126 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 A0A1W2PP11 408 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 AKR7A2O43488 359 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 GPR137BO60478 399 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 NOS1APO75052 506 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 NXPH2O95156 264 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 CRYBA1P05813 215 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 LIPFP07098 398 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PGA5P0DJD9 388 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 SELLP14151 372 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PRKACAP17612 351 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 GLRA1P23415 457 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 GABRR1P24046 479 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 CD40LGP29965 261 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 MNDAP41218 407 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 IER3P46695 156 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 VEGFCP49767 419 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PPP5CP53041 499 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 RBM11P57052 281 aaKnown RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 BPIFB3P59826 476 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PLA2G7Q13093 441 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 ARL6IP1Q15041 203 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 METTL11BQ5VVY1 283 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 TEX36Q5VZQ5 186 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 PYHIN1Q6K0P9 492 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 BRICD5Q6PL45 260 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 LINC00596Q86U02 117 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 BATF2Q8N1L9 274 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 MFSD4AQ8N468 514 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 DTX3Q8N9I9 347 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 OR10R2Q8NGX6 335 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 OR10Z1Q8NGY1 313 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 LRRC29Q8WV35 223 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 CCL13Q99616 98 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 NRIP2Q9BQI9 281 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 RBFOX1Q9NWB1 397 aaKnown RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 RPUSD1Q9UJJ7 312 aaKnown RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 MRPS7Q9Y2R9 242 aaKnown RBP8.47□□□□□ -1.05
NEDD8-202ENST00000396828 RNF114Q9Y508 228 aa8.47□□□□□ -1.05
NEDD8-202ENST00000396828 TRAV18A0A075B6X5 111 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 TRAV38-1A0A0B4J264 116 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 A0A1B0GUS0 222 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A10PA6NDY2 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A18PA6NE21 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A16PA6NEW6 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A20PA6NIJ5 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A8PA6NJQ4 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A7PA6NKC0 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A22PA8MWA6 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A12PA8MX19 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A5PA8MXJ8 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A23PA8MXZ1 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A15PP0C7V4 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A13PP0C7W8 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A14PP0C7W9 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM90A24PP0C7X0 464 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 BLVRBP30043 206 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-202ENST00000396828 PROK1P58294 105 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 TAS2R20P59543 309 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 ERVK11-1P61568 191 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 MADCAM1Q13477 382 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 TAF9Q16594 264 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 MPV17LQ2QL34 196 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 SMIM21Q3B7S5 101 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 PIGYQ3MUY2 71 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 NHLRC3Q5JS37 347 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 SPIN3Q5JUX0 258 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 Q6ZSV7 163 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 VMO1Q7Z5L0 202 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 IZUMO1Q8IYV9 350 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 PNKDQ8N490 385 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 FAM216BQ8N7L0 139 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 GDPD1Q8N9F7 314 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms