RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 CD8AP01732 235 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 DANCRP0C864 163 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 GABRA2P47869 451 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 HERPUD1Q15011 391 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 IGSF11Q5DX21 431 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 METTL11BQ5VVY1 283 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 C5orf24Q7Z6I8 188 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 PEG10Q86TG7 708 aaKnown RBP16.98■□□□□ 0.31
HDDC3-202ENST00000394272 ASCC1Q8N9N2 400 aaKnown RBP16.98■□□□□ 0.31
HDDC3-202ENST00000394272 MARCH1Q8TCQ1 289 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 SNX22Q96L94 193 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 ZNF2Q9BSG1 426 aaPredicted RBP16.98■□□□□ 0.31
HDDC3-202ENST00000394272 OR51J1Q9H342 316 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 TMEM106BQ9NUM4 274 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 MAB21L2Q9Y586 359 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 TMEM30CPA0ZSE6 113 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 NPY4RP50391 375 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 RRAS2P62070 204 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 HLA-DRB3P79483 266 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 AESQ08117 197 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 CD300CQ08708 224 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 CBX3Q13185 183 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 C1orf87Q8N0U7 546 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 CCDC107Q8WV48 283 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 PPP1R14BQ96C90 147 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 SDSLQ96GA7 329 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 SEC22CQ9BRL7 303 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 FBXO9Q9UK97 447 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 GPR132Q9UNW8 380 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 UBR5O95071 2799 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 IGKV1-6A0A0C4DH72 117 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 SOD3P08294 240 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 FPR2P25090 351 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 MEX3BQ6ZN04 569 aaKnown RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 TMED4Q7Z7H5 227 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 DTX2Q86UW9 622 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 CAPSLQ8WWF8 208 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 CCL17Q92583 94 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 VRK1Q99986 396 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 TRAPPC2LQ9UL33 140 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 MGAT4AQ9UM21 535 aa16.97■□□□□ 0.31
HDDC3-202ENST00000394272 KLF2Q9Y5W3 355 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-202ENST00000394272 A6NNC1 897 aa16.96■□□□□ 0.31
HDDC3-202ENST00000394272 AKAP14Q86UN6 197 aa16.96■□□□□ 0.31
HDDC3-202ENST00000394272 TMPRSS13Q9BYE2 586 aa16.96■□□□□ 0.31
HDDC3-202ENST00000394272 C5orf66Q9H5L9 145 aa16.96■□□□□ 0.31
HDDC3-202ENST00000394272 FAM208BQ5VWN6 2430 aa16.96■□□□□ 0.31
HDDC3-202ENST00000394272 TRAV39A0A0B4J263 110 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 IGHV1-69-2A0A0G2JMI3 117 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 SNRPGP15A8MWD9 76 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 K7N7A8 449 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 LGALS8O00214 317 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 CTXN2P0C2S0 81 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 FCGR2CP31995 323 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 SRSF1Q07955 248 aaKnown RBP eCLIP16.95■□□□□ 0.3
HDDC3-202ENST00000394272 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-202ENST00000394272 C11orf91Q3C1V1 193 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF626Q68DY1 528 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF788Q6ZQV5 615 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF554Q86TJ5 538 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 SLC25A42Q86VD7 318 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF561Q8N587 486 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ZNRF1Q8ND25 227 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 DEFB108BQ8NET1 73 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 OR4A4PQ8NGN8 299 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 PPP1R35Q8TAP8 253 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 SCGB3A2Q96PL1 93 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 CABLES2Q9BTV7 478 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 KIF25Q9UIL4 384 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 DSCAML1Q8TD84 2053 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 OR4E1P0C645 316 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 ECI1P42126 302 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 GLP1RP43220 463 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 HMGN3Q15651 99 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 KRBOX4Q5JUW0 171 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 OR52B4Q8NGK2 314 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 DACT3Q96B18 629 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-202ENST00000394272 GAFA1Q96PS6 74 aa16.95■□□□□ 0.3
HDDC3-202ENST00000394272 GPN1Q9HCN4 374 aaPredicted RBP16.95■□□□□ 0.3
HDDC3-202ENST00000394272 CHD6Q8TD26 2715 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 PPIAL4EA0A075B759 164 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 TRAV38-1A0A0B4J264 116 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 PPIAL4DF5H284 164 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 MGST3O14880 152 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 GYPAP02724 150 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 TK1P04183 234 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 PPIAL4FP0DN26 164 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 SEC61A1P61619 476 aaKnown RBP16.94■□□□□ 0.3
HDDC3-202ENST00000394272 TRAF4Q9BUZ4 470 aaPredicted RBP16.94■□□□□ 0.3
HDDC3-202ENST00000394272 PCDHB10Q9UN67 800 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 PPIAL4AQ9Y536 164 aa16.94■□□□□ 0.3
HDDC3-202ENST00000394272 CREBL2O60519 120 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 CCNKO75909 580 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 GOSR1O95249 250 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 NFYAP23511 347 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 GLIPR1P48060 266 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 BAMBIQ13145 260 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 CD276Q5ZPR3 534 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 FAHD2BQ6P2I3 314 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 ADAD2Q8NCV1 583 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms