RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-202ENST00000393773 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 TRAV24A0A0B4J272 114 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 IGHV1-3A0A0C4DH29 117 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 H0YJX3 145 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 DEGS1O15121 323 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 GPR50Q13585 617 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 LTC4SQ16873 150 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 PNLIPRP3Q17RR3 467 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.49
CHMP3-202ENST00000393773 CXorf66Q5JRM2 361 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-202ENST00000393773 Q8N9W7 124 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 HAVCR2Q8TDQ0 301 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 C4orf3Q8WVX3 66 aa12.02□□□□□ -0.49
CHMP3-202ENST00000393773 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-202ENST00000393773 A0A1W2PPE3 182 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 ELANEP08246 267 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 OCM2P0CE71 109 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-202ENST00000393773 REG1BP48304 166 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 MTNR1BP49286 362 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 TMED1Q13445 227 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 ZNF565Q8N9K5 539 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 Q8NFD4 153 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 OR13C3Q8NGS6 347 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 MYOZ3Q8TDC0 251 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 MRGPRDQ8TDS7 321 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 EME1Q96AY2 570 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 RCHY1Q96PM5 261 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 CIB1Q99828 191 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 HSPB9Q9BQS6 159 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 POMPQ9Y244 141 aa12.01□□□□□ -0.49
CHMP3-202ENST00000393773 IGHV3-72A0A0B4J1Y9 119 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 CCRL2O00421 344 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 ATP8B1O43520 1251 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 DBTP11182 482 aaKnown RBP12□□□□□ -0.49
CHMP3-202ENST00000393773 C21orf33P30042 268 aaPredicted RBP12□□□□□ -0.49
CHMP3-202ENST00000393773 CCR9P51686 369 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 ATP6AP1Q15904 470 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 ZNF260Q3ZCT1 412 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 ELP2Q6IA86 826 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 SLC16A12Q6ZSM3 486 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 TMEM104Q8NE00 496 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 RFESDQ8TAC1 157 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 CNIH3Q8TBE1 160 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 GON7Q9BXV9 100 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 GABARAPL3Q9BY60 117 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 ZCCHC4Q9H5U6 513 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 PLSCR3Q9NRY6 295 aa12□□□□□ -0.49
CHMP3-202ENST00000393773 SIRT4Q9Y6E7 314 aaPredicted RBP12□□□□□ -0.49
CHMP3-202ENST00000393773 TRAV39A0A0B4J263 110 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 OR4C45A6NMZ5 311 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 NCBP2LA6PVI3 153 aaKnown RBP11.99□□□□□ -0.49
CHMP3-202ENST00000393773 G3V2T6 193 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 J3QRE1 110 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 SLC16A6O15403 523 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 IGHG4P01861 327 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 TMEM225BP0DP42 221 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 PSMB8P28062 276 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 ATP6V1E1P36543 226 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 POLR2IP36954 125 aaKnown RBP11.99□□□□□ -0.49
CHMP3-202ENST00000393773 IL13RA2Q14627 380 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 KISS1Q15726 138 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 MOB3BQ86TA1 216 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 SBSPONQ8IVN8 264 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 FAM71E2Q8N5Q1 922 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 OR8J1Q8NGP2 316 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 GAR1Q9NY12 217 aaKnown RBP11.99□□□□□ -0.49
CHMP3-202ENST00000393773 ZNF581Q9P0T4 197 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 ENOPH1Q9UHY7 261 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 ZNF580Q9UK33 172 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
CHMP3-202ENST00000393773 LCE6AA0A183 80 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 SULT1B1O43704 296 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 MPZL2O60487 215 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 GAPDHP04406 335 aaKnown RBP11.98□□□□□ -0.49
CHMP3-202ENST00000393773 HCKP08631 526 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 HTR1AP08908 422 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 ZSCAN26Q16670 478 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 PIGYQ3MUY2 71 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 ZNF691Q5VV52 312 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 LINC00311Q8N616 119 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 CCDC197Q8NCU1 140 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 OR2T10Q8NGZ9 312 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 RTN4IP1Q8WWV3 396 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-202ENST00000393773 RFKQ969G6 155 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 ST6GALNAC6Q969X2 333 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 PELI1Q96FA3 418 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-202ENST00000393773 BARHL1Q9BZE3 327 aa11.98□□□□□ -0.49
CHMP3-202ENST00000393773 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
CHMP3-202ENST00000393773 KCNJ3P48549 501 aa11.97□□□□□ -0.49
CHMP3-202ENST00000393773 LPCAT4Q643R3 524 aa11.97□□□□□ -0.49
CHMP3-202ENST00000393773 PARP16Q8N5Y8 322 aa11.97□□□□□ -0.49
CHMP3-202ENST00000393773 PXT1Q8NFP0 134 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms