RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 RGS7BPQ6MZT1 257 aaPredicted RBP9.29□□□□□ -0.92
CASP3-202ENST00000393585 VHLLQ6RSH7 139 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 ACOT7LQ6ZUV0 252 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 PRR18Q8N4B5 295 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 POC1AQ8NBT0 407 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 C2orf50Q96LR7 162 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 MSRB2Q9Y3D2 182 aa9.29□□□□□ -0.92
CASP3-202ENST00000393585 PRRG2O14669 202 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 DIRAS3O95661 229 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 RLN2P04090 185 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 GNRHRP30968 328 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 UCP3P55916 312 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 ZNF345Q14585 488 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 SRSF7Q16629 238 aaKnown RBP eCLIP9.28□□□□□ -0.92
CASP3-202ENST00000393585 SPIN3Q5JUX0 258 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 FAM209AQ5JX71 171 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 GGNBP1Q5YKI7 109 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 GFRALQ6UXV0 394 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 ZNF818PQ6ZRF7 136 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 SLC51BQ86UW2 128 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 INO80EQ8NBZ0 244 aaPredicted RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 IL1F10Q8WWZ1 152 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 RRNAD1Q96FB5 475 aaKnown RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 GALNT14Q96FL9 552 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 RSRP1Q9BUV0 290 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 CXXC4Q9H2H0 198 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 IFT22Q9H7X7 185 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 RELNP78509 3460 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 PLCE1Q9P212 2302 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 A0A0G2JNJ9 132 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 KANTRA0A1W2PQU2 76 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 A8MXE2 369 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 LEUTXA8MZ59 168 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 PHF1O43189 567 aaPredicted RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 LUMP51884 338 aaPredicted RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 RAB14P61106 215 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 ZNF146Q15072 292 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 MBNL2Q5VZF2 373 aaKnown RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 PCSK4Q6UW60 755 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 LYZL2Q7Z4W2 148 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 GLYATL2Q8WU03 294 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 KIRREL1Q96J84 757 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 TP53RKQ96S44 253 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 ZNF471Q9BX82 626 aaPredicted RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
CASP3-202ENST00000393585 ASF1BQ9NVP2 202 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 Q9UFV3 132 aa9.28□□□□□ -0.92
CASP3-202ENST00000393585 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 MSGN1A6NI15 193 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 SH2D1BO14796 132 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 PSPNO60542 156 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 HAND1O96004 215 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 CRYAAP02489 173 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 IL15RAQ13261 267 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 WDR82Q6UXN9 313 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 FAM169BQ8N8A8 192 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 OR2Z1Q8NG97 314 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 LHFPL5Q8TAF8 219 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 SYT3Q9BQG1 590 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 RHOFQ9HBH0 211 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 TRBV6-6A0A0A6YYG2 114 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 HSD17B6O14756 317 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 BCL2L11O43521 198 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 TUSC2O75896 110 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 GLAP06280 429 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 KCNJ3P48549 501 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 ZNF880Q6PDB4 577 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 MEX3BQ6ZN04 569 aaKnown RBP9.27□□□□□ -0.93
CASP3-202ENST00000393585 GAPTQ8N292 157 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 ZNF565Q8N9K5 539 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 SCARB1Q8WTV0 552 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 ST8SIA2Q92186 375 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 MSI2Q96DH6 328 aaKnown RBP9.27□□□□□ -0.93
CASP3-202ENST00000393585 SLC5A7Q9GZV3 580 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 HES4Q9HCC6 221 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 CCL28Q9NRJ3 127 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 OR1A1Q9P1Q5 309 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 TRAPPC2LQ9UL33 140 aa9.27□□□□□ -0.93
CASP3-202ENST00000393585 TRBV6-7A0A0A0MS04 114 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 MPPED1O15442 326 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 IFNA21P01568 189 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 TUBG1P23258 451 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 CCKARP32238 428 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 ZNF497Q6ZNH5 498 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 TBC1D26Q86UD7 250 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 CCDC71LQ8N9Z2 235 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 RELL2Q8NC24 303 aaPredicted RBP9.26□□□□□ -0.93
CASP3-202ENST00000393585 OR1S1Q8NH92 325 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 SUCNR1Q9BXA5 334 aa9.26□□□□□ -0.93
CASP3-202ENST00000393585 TUBG2Q9NRH3 451 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms