RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RAB18Q9NP72 206 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 PCDHB10Q9UN67 800 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 ATRXP46100 2492 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 CCL21O00585 134 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 IFNA2P01563 188 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 FGL1Q08830 312 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 ANKRD55Q3KP44 614 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 FBXL19-AS1Q494R0 122 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 ABCA11PQ4W5N1 156 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 OR5T2Q8NGG2 359 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 WFIKKN1Q96NZ8 548 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 CABLES2Q9BTV7 478 aa17.99■□□□□ 0.47
SPHK1-202ENST00000392496 IGKV1-6A0A0C4DH72 117 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 RFPL4AA6NLU0 287 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 SRRM5B3KS81 715 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 RFPL4AL1F8VTS6 287 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 BET1O15155 118 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 SPRY3O43610 288 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 TUSC2O75896 110 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 RCC1P18754 421 aaPredicted RBP17.98■□□□□ 0.47
SPHK1-202ENST00000392496 CHRNB4P30926 498 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 GATA4P43694 442 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 ZNF81P51508 661 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 PIGPP57054 158 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 FAM90A1Q86YD7 464 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 SEBOXQ9HB31 216 aaPredicted RBP17.98■□□□□ 0.47
SPHK1-202ENST00000392496 WIPI2Q9Y4P8 454 aa17.98■□□□□ 0.47
SPHK1-202ENST00000392496 TEX13DA0A0J9YY54 714 aaPredicted RBP17.97■□□□□ 0.47
SPHK1-202ENST00000392496 RBMXP38159 391 aaKnown RBP17.97■□□□□ 0.47
SPHK1-202ENST00000392496 KCNJ3P48549 501 aa17.97■□□□□ 0.47
SPHK1-202ENST00000392496 CEBPDP49716 269 aaPredicted RBP17.97■□□□□ 0.47
SPHK1-202ENST00000392496 GSG1LQ6UXU4 331 aa17.97■□□□□ 0.47
SPHK1-202ENST00000392496 C5orf24Q7Z6I8 188 aa17.97■□□□□ 0.47
SPHK1-202ENST00000392496 MBNL3Q9NUK0 354 aaKnown RBP17.97■□□□□ 0.47
SPHK1-202ENST00000392496 ZDHHC8Q9ULC8 765 aa17.97■□□□□ 0.47
SPHK1-202ENST00000392496 KCNIP3Q9Y2W7 256 aa17.97■□□□□ 0.47
SPHK1-202ENST00000392496 CHD3Q12873 2000 aaKnown RBP17.97■□□□□ 0.47
SPHK1-202ENST00000392496 PSPNO60542 156 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 SORDQ00796 357 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 ATXN7L3Q14CW9 347 aaPredicted RBP17.96■□□□□ 0.47
SPHK1-202ENST00000392496 CCDC71LQ8N9Z2 235 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 ITLN1Q8WWA0 313 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 GALNT14Q96FL9 552 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 NAA60Q9H7X0 242 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 SLC2A9Q9NRM0 540 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 COMMD9Q9P000 198 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 IL19Q9UHD0 177 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 TRAPPC2LQ9UL33 140 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 TRBV6-7A0A0A0MS04 114 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 TRAV14DV4A0A0A6YYC5 116 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 FAM25EA8MYX2 175 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 NPIPB11E5RHQ5 1161 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 C4BPBP20851 252 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 SERPINF1P36955 418 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 SLC35E4Q6ICL7 350 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 RTN4IP1Q8WWV3 396 aaPredicted RBP17.96■□□□□ 0.47
SPHK1-202ENST00000392496 SEC22AQ96IW7 307 aa17.96■□□□□ 0.47
SPHK1-202ENST00000392496 COL6A6A6NMZ7 2263 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 TMEM30CPA0ZSE6 113 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 C5orf51A6NDU8 294 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 IGHV1-46P01743 117 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 TNFSF4P23510 183 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 CYCSP99999 105 aaKnown RBP17.95■□□□□ 0.46
SPHK1-202ENST00000392496 POLEQ07864 2286 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 MOGAT3Q86VF5 341 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 FAM185AQ8N0U4 392 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 NMES1Q9C002 83 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 COQ3Q9NZJ6 369 aa17.95■□□□□ 0.46
SPHK1-202ENST00000392496 EGR1P18146 543 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 TNFAIP6P98066 277 aaPredicted RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 HOXA4Q00056 320 aaPredicted RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 SPRNQ5BIV9 151 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 GCSAMQ8N6F7 178 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 RNASE6Q93091 150 aaKnown RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 ESRP2Q9H6T0 727 aaKnown RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 PRR13Q9NZ81 148 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 IGSF10Q6WRI0 2623 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 PCNX1Q96RV3 2341 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 FXYD6-FXYD2A0A087WZ82 144 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 VSTM5A8MXK1 200 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 L7N2F9 121 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 LHBP01229 141 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 SLC25A4P12235 298 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 CXCL2P19875 107 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 COL10A1Q03692 680 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 HMGN3Q15651 99 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 ADIPOQQ15848 244 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 PHLDA2Q53GA4 152 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 NCMAPQ5T1S8 102 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 H1FOOQ8IZA3 346 aaPredicted RBP17.94■□□□□ 0.46
SPHK1-202ENST00000392496 ZNF565Q8N9K5 539 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 OR10J5Q8NHC4 309 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 ERGIC1Q969X5 290 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 DIRC2Q96SL1 478 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 SUCNR1Q9BXA5 334 aa17.94■□□□□ 0.46
SPHK1-202ENST00000392496 C13orf42A0A1B0GVH6 325 aa17.93■□□□□ 0.46
SPHK1-202ENST00000392496 B8ZZF3 427 aa17.93■□□□□ 0.46
SPHK1-202ENST00000392496 ADAP1O75689 374 aa17.93■□□□□ 0.46
SPHK1-202ENST00000392496 ADH4P08319 380 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms