RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ZBTB8OSQ8IWT0 167 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 FAM58AQ8N1B3 248 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ATPAF2Q8N5M1 289 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ACBD7Q8N6N7 88 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 LRRC52Q8N7C0 313 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 CLDN22Q8N7P3 220 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 Q8N976 141 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 OR8J3Q8NGG0 315 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 OR2A1Q8NGT9 310 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 OR10J6PQ8NGY7 276 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 NEK7Q8TDX7 302 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DEDD2Q8WXF8 326 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TFGQ92734 400 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 KIAA1143Q96AT1 154 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 CCDC124Q96CT7 223 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 NARS2Q96I59 477 aaKnown RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 PACRGQ96M98 296 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM56Q96MV1 263 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 LINC00052Q96N35 136 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 RDH12Q96NR8 316 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 PFDN5Q99471 154 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 C11orf70Q9BRQ4 267 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 CHAC1Q9BUX1 264 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DSN1Q9H410 356 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TUBA4BQ9H853 241 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 CCNB1IP1Q9NPC3 277 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 LHX9Q9NQ69 397 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 DYRK4Q9NR20 520 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TAS2R9Q9NYW1 312 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 MTCH1Q9NZJ7 389 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TBX21Q9UL17 535 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 ST3GAL6Q9Y274 331 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 PCYT1BQ9Y5K3 369 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM56-RWDD3S4R434 201 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 LY75O60449 1722 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 NUP210LQ5VU65 1888 aa1.96□□□□□ -2.1
PTPRC-205ENST00000391970 COL14A1Q05707 1796 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 NRXN3Q9Y4C0 1643 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RICTORQ6R327 1708 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IGLV4-69A0A075B6H9 119 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IGLV3-16A0A075B6K0 115 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IGHV3-74A0A0B4J1X5 117 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PNMA8CA0A1B0GUJ8 204 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1W2PPV4 95 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 C7orf66A4D0T2 115 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CLDN24A6NM45 220 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SEC14L6B5MCN3 397 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 INS-IGF2F8WCM5 200 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TSTD3H0UI37 97 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SCAMP2O15127 329 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SLC16A4O15374 487 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SNAI2O43623 268 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 ANGPTL7O43827 346 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GADD45GO95257 159 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SERPINA1P01009 418 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IGF2P01344 180 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RLN2P04090 185 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 APODP05090 189 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 FABP3P05413 133 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SERPINE2P07093 398 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 NMBP08949 121 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TSPAN19P0C672 248 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 STAG3L2P0CL84 134 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 C1GALT1C1LP0DN25 315 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 MYL2P10916 166 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 HLA-GP17693 338 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GPX2P18283 190 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PTNP21246 168 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 STOMP27105 288 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GTF2E2P29084 291 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GNRHRP30968 328 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IFNGR2P38484 337 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CEACAM3P40198 252 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CDKN2BP42772 138 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CX3CR1P49238 355 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 MRPL19P49406 292 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CDC34P49427 236 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RAB9AP51151 201 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CRISP1P54107 249 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CLDN18P56856 261 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 KLF3P57682 345 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 EMX1Q04741 257 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TCP10Q12799 353 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 BIKQ13323 160 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 BTN1A1Q13410 526 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OR8G1Q15617 311 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OR7A5Q15622 319 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 VAMP3Q15836 100 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF726P1Q15940 193 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 LRRC26Q2I0M4 334 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PGGHGQ32M88 737 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 AVPI1Q5T686 147 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SYT6Q5T7P8 510 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OR52W1Q6IF63 320 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 FAM183BPQ6ZVS7 135 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GRINAQ7Z429 371 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CYP4Z1Q86W10 505 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CMTM1Q8IZ96 169 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OFCC1Q8IZS5 231 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 GABRG1Q8N1C3 465 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms