RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CST11Q9H112 138 aa10.28□□□□□ -0.76
GGPS1-203ENST00000391855 PPIL3Q9H2H8 161 aaKnown RBP10.28□□□□□ -0.76
GGPS1-203ENST00000391855 ABCB10Q9NRK6 738 aa10.28□□□□□ -0.76
GGPS1-203ENST00000391855 KIF25Q9UIL4 384 aa10.28□□□□□ -0.76
GGPS1-203ENST00000391855 ANK2Q01484 3957 aa10.28□□□□□ -0.76
GGPS1-203ENST00000391855 A0A087X0M5 115 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 KBTBD11-OT1A0A1B0GTJ5 212 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 A0A1B0GX30 115 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 TMEM30CPA0ZSE6 113 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 CLPSL1A2RUU4 121 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 ARL6IP5O75915 188 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 HSMCR30P0CW71 290 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 CPEP16870 476 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 MDKP21741 143 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-203ENST00000391855 HTR1DP28221 377 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 DYNLT3P51808 116 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 ARHGDIBP52566 201 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 RBM39Q14498 530 aaKnown RBP10.27□□□□□ -0.77
GGPS1-203ENST00000391855 PRAMEF5Q5TYX0 476 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 SLC35E4Q6ICL7 350 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 CEACAM19Q7Z692 300 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 SVOPQ8N4V2 548 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 SGMS2Q8NHU3 365 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 NDNFQ8TB73 568 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 C17orf50Q8WW18 174 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 MGLLQ99685 303 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 RAB9BQ9NP90 201 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 ING3Q9NXR8 418 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 RCC2Q9P258 522 aaKnown RBP10.27□□□□□ -0.77
GGPS1-203ENST00000391855 PITPNC1Q9UKF7 332 aa10.27□□□□□ -0.77
GGPS1-203ENST00000391855 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
GGPS1-203ENST00000391855 CA11O75493 328 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 IL1AP01583 271 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 GLAP06280 429 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 CGB3P0DN86 165 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 CGB7P0DN87 165 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 MGMTP16455 207 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 SRMP19623 302 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 RELBQ01201 579 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 ATAD3CQ5T2N8 411 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 OLFML2AQ68BL7 652 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 ABHD12Q8N2K0 398 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 OR4P4Q8NGL7 312 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 PLPPR1Q8TBJ4 325 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 YTHDF1Q9BYJ9 559 aaKnown RBP10.26□□□□□ -0.77
GGPS1-203ENST00000391855 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 RANBP3Q9H6Z4 567 aaPredicted RBP10.26□□□□□ -0.77
GGPS1-203ENST00000391855 LINC00574Q9H8X3 128 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 CALYQ9NYX4 217 aa10.26□□□□□ -0.77
GGPS1-203ENST00000391855 A0A1W2PP11 408 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 MCRIP1C9JLW8 97 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 TOR1AO14656 332 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
GGPS1-203ENST00000391855 MMP23AO75900 390 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 TSPAN9O75954 239 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 OMGP23515 440 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 GABRA5P31644 462 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 CEACAM3P40198 252 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 FAM189A2Q15884 450 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 SSX2Q16385 188 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 C1orf100Q5SVJ3 147 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 SLC16A12Q6ZSM3 486 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 LRRTM1Q86UE6 522 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 OR13A1Q8NGR1 328 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 OR9G1Q8NH87 305 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 KIRREL1Q96J84 757 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 ACOT13Q9NPJ3 140 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 IDI2-AS1Q9NZ38 188 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 TCF19Q9Y242 345 aa10.25□□□□□ -0.77
GGPS1-203ENST00000391855 AMMECR1Q9Y4X0 333 aaPredicted RBP10.25□□□□□ -0.77
GGPS1-203ENST00000391855 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 OOSP1A8MZH6 123 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 NPIPB11E5RHQ5 1161 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 IGLV1-47P01700 117 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 GZMHP20718 246 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 HTR2CP28335 458 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 MAP2K4P45985 399 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 PRRX1P54821 245 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 GP2P55259 537 aaKnown RBP10.24□□□□□ -0.77
GGPS1-203ENST00000391855 RPS25P62851 125 aaKnown RBP10.24□□□□□ -0.77
GGPS1-203ENST00000391855 INSL4Q14641 139 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 HLA-DRB5Q30154 266 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 TMEM30BQ3MIR4 351 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 FAM27D1Q5T7N8 215 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 C11orf88Q6PI97 169 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 Q6ZSV7 163 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 OR4C13Q8NGP0 309 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 MRGPRDQ8TDS7 321 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 WFDC12Q8WWY7 111 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 FCGR1BQ92637 280 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 Q96M66 194 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 NPFFR1Q9GZQ6 430 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 ZNF286AQ9HBT8 521 aa10.24□□□□□ -0.77
GGPS1-203ENST00000391855 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms