RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MRPS30Q9NP92 439 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RRAGDQ9NQL2 400 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RGS18Q9NS28 235 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RBFOX1Q9NWB1 397 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NOL12Q9UGY1 213 aaKnown RBP eCLIP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PRO0255Q9UI72 69 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 AP3M1Q9Y2T2 418 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 KCNIP3Q9Y2W7 256 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 WASHC3Q9Y3C0 194 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GOLT1BQ9Y3E0 138 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TIMM10BQ9Y5J6 103 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TIMM9Q9Y5J7 89 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ENPP4Q9Y6X5 453 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PHF3Q92576 2039 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CDHR2Q9BYE9 1310 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MYO9AB2RTY4 2548 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GPRASP1Q5JY77 1395 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 JCADQ9P266 1359 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 LOC285556D6RIA3 1793 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SLX4Q8IY92 1834 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NPHP4O75161 1426 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 DENND4CQ5VZ89 1909 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 EXPH5Q8NEV8 1989 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CITO14578 2027 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CEP290O15078 2479 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FRYQ5TBA9 3013 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 hCG_2014768A0A024R1R8 64 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAV7A0A075B6U4 112 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 IGHV1-58A0A0C4DH39 117 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC5A10A0PJK1 596 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RNF222A6NCQ9 220 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CFAP73A6NFT4 308 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 LRRIQ3A6PVS8 624 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C9J4A7 227 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 K7EP34 96 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 BCKDKO14874 412 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MED7O43513 233 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FADS1O60427 444 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PTP4A3O75365 173 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ZMPSTE24O75844 475 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ATP5LO75964 103 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2J3O76001 311 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 NEBLO76041 1014 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR5F1O95221 314 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 HLA-HP01893 362 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PMP2P02689 132 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ABHD2P08910 425 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 NMBP08949 121 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ASAH2BP0C7U1 165 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MGST1P10620 155 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 HSPA5P11021 654 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RALAP11233 206 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 IL32P24001 234 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CRHBPP24387 322 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MYL9P24844 172 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMA2P25787 234 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 IMPA1P29218 277 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MAN1A1P33908 653 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PFN2P35080 140 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OPRM1P35372 400 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CYLC1P35663 651 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 GPX4P36969 197 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MDH1P40925 334 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CASP2P42575 452 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CRATP43155 626 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CAPZA2P47755 286 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ATP5G3P48201 142 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CAV3P56539 151 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ACTG2P63267 376 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC25A11Q02978 314 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SCARB2Q14108 478 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 NDUFA5Q16718 116 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 GOLGA7BQ2TAP0 167 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 DEFB135Q30KP9 77 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 NADK2Q4G0N4 442 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RBM48Q5RL73 367 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C1orf185Q5T7R7 199 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM236Q5W0B7 351 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 LAIR2Q6ISS4 152 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 KRT80Q6KB66 452 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAT1Q6PIZ9 186 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 KDELC1Q6UW63 502 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CASC2Q6XLA1 102 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 BZW1Q7L1Q6 419 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM150AQ86TG1 271 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CERS3Q8IU89 383 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC50Q8IVM0 306 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PDIK1LQ8N165 341 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 LINC00311Q8N616 119 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM133AQ8N9E0 248 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 STXBP6Q8NFX7 210 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR52E2Q8NGJ4 325 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR1S1Q8NH92 325 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR5K2Q8NHB8 316 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 LYPD6BQ8NI32 183 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RHEBL1Q8TAI7 183 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CXorf40AQ8TE69 158 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MITD1Q8WV92 249 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 KCTD4Q8WVF5 259 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PIBF1Q8WXW3 757 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms