RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 SHISA3A0PJX4 238 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 NTF3P20783 257 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
PSME4-201ENST00000389993 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 RPS4Y2Q8TD47 263 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 GP1BAP07359 652 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 LINC01560Q8TB33 94 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 SMCO4Q9NRQ5 59 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 CLN8Q9UBY8 286 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 HILPDAQ9Y5L2 63 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 IGHV3OR16-10A0A075B7F0 116 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 OR5B21A6NL26 309 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 ZNF90Q03938 601 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 A0A1W2PPQ1 181 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 DUS4LO95620 317 aaKnown RBP12.64□□□□□ -0.39
PSME4-201ENST00000389993 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 ZNF519Q8TB69 540 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 GNPNAT1Q96EK6 184 aaPredicted RBP12.64□□□□□ -0.39
PSME4-201ENST00000389993 DDA1Q9BW61 102 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 CHCHD2Q9Y6H1 151 aaPredicted RBP12.64□□□□□ -0.39
PSME4-201ENST00000389993 LINC00271P0C7V0 271 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 MRPS11P82912 194 aaKnown RBP12.64□□□□□ -0.39
PSME4-201ENST00000389993 FAM201AQ5SY85 155 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 SLC25A47Q6Q0C1 308 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 FLVCR1-AS1Q8TAF5 88 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 AMDHD2Q9Y303 409 aa12.64□□□□□ -0.39
PSME4-201ENST00000389993 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 ZNF552Q9H707 407 aaPredicted RBP12.63□□□□□ -0.39
PSME4-201ENST00000389993 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 UMODP07911 640 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 COX5AP20674 150 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 SSBP1Q04837 148 aaKnown RBP12.63□□□□□ -0.39
PSME4-201ENST00000389993 ZNF441Q8N8Z8 693 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 HES4Q9HCC6 221 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 EFEMP2O95967 443 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 DAOP14920 347 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 CTRB1P17538 263 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 CTRB2Q6GPI1 263 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 OR13D1Q8NGV5 346 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 RAB18Q9NP72 206 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 TIMM9Q9Y5J7 89 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 NCOR1O75376 2440 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 TO15178 435 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 CLDN14O95500 239 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 ZP4Q12836 540 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 PHYHD1Q5SRE7 291 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 FAM27BQ5VT28 67 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
PSME4-201ENST00000389993 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 HLA-DQB1P01920 261 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 MMP16P51512 607 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 UBE2V2Q15819 145 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
PSME4-201ENST00000389993 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 RALGAPA1Q6GYQ0 2036 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 ZNF785A8K8V0 405 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 THBS3P49746 956 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 LGALSLQ3ZCW2 172 aaPredicted RBP12.62□□□□□ -0.39
PSME4-201ENST00000389993 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 ARL16Q0P5N6 197 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 TIMP4Q99727 224 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 DOCK9Q9BZ29 2069 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 WNT9BO14905 357 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 OR5I1Q13606 314 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 OR2C3Q8N628 320 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 POLEQ07864 2286 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 OR4A8P0C604 315 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 LYZP61626 148 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 MRPS18AQ9NVS2 196 aaKnown RBP12.62□□□□□ -0.39
PSME4-201ENST00000389993 FAM206AQ9NX38 181 aa12.62□□□□□ -0.39
PSME4-201ENST00000389993 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 CYTIPO60759 359 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
PSME4-201ENST00000389993 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.61□□□□□ -0.39
PSME4-201ENST00000389993 A1L4Q6 167 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 SLC31A2O15432 143 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 VMA21Q3ZAQ7 101 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
PSME4-201ENST00000389993 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 C1QL2Q7Z5L3 287 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 ZNF485Q8NCK3 441 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 OOEPA6NGQ2 149 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 ZIC3O60481 467 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 TGIF2LXQ8IUE1 241 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 DUSP18Q8NEJ0 188 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 MS4A7Q9GZW8 240 aaPredicted RBP12.61□□□□□ -0.39
PSME4-201ENST00000389993 F12P00748 615 aaPredicted RBP12.61□□□□□ -0.39
PSME4-201ENST00000389993 CELA3BP08861 270 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 GUK1Q16774 197 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
PSME4-201ENST00000389993 SLC25A38Q96DW6 304 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms