RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZNF695Q8IW36 515 aa12.77□□□□□ -0.36
SCFD2-201ENST00000388940 SUMF2Q8NBJ7 301 aa12.77□□□□□ -0.36
SCFD2-201ENST00000388940 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.36
SCFD2-201ENST00000388940 ARID1AO14497 2285 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 IGKV1-6A0A0C4DH72 117 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 FAM157AC9JC47 383 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 SLC34A2O95436 690 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 UCP1P25874 307 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 Q3ZCU0 254 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 HIKESHIQ53FT3 197 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 SPIN3Q5JUX0 258 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 GAPTQ8N292 157 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 MRPL30Q8TCC3 161 aaKnown RBP12.77□□□□□ -0.37
SCFD2-201ENST00000388940 IL22RA2Q969J5 263 aa12.77□□□□□ -0.37
SCFD2-201ENST00000388940 TRAV20A0A0B4J274 112 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 H7C2Y5 167 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 SOX8P57073 446 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 PCSK4Q6UW60 755 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 FAM58AQ8N1B3 248 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 WNT2BQ93097 391 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 BOD1Q96IK1 185 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 OR51I2Q9H344 312 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 STRAPQ9Y3F4 350 aaKnown RBP12.76□□□□□ -0.37
SCFD2-201ENST00000388940 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 IGKV1D-13A0A0B4J2D9 117 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 HEXAP06865 529 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 SFTA3P0C7M3 94 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 IGKV1-13P0DP09 117 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 NKX2-1P43699 371 aaPredicted RBP12.76□□□□□ -0.37
SCFD2-201ENST00000388940 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
SCFD2-201ENST00000388940 NHLH2Q02577 135 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 OR2C3Q8N628 320 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 ADAT1Q9BUB4 502 aaKnown RBP12.76□□□□□ -0.37
SCFD2-201ENST00000388940 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 C12orf49Q9H741 205 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 ZDHHC11Q9H8X9 412 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 LUZP4Q9P127 313 aa12.76□□□□□ -0.37
SCFD2-201ENST00000388940 KNTC1P50748 2209 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 LILRA1O75019 489 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 MMP9P14780 707 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 PVALBP20472 110 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-201ENST00000388940 VDAC1P21796 283 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 NPBWR1P48145 328 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 NMSQ5H8A3 153 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 FAM76BQ5HYJ3 339 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 MDP1Q86V88 176 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 IL22RA1Q8N6P7 574 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 KIRREL1Q96J84 757 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 SPRR3Q9UBC9 169 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
SCFD2-201ENST00000388940 PIGBOS1A0A0B4J2F0 54 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 H0Y980 276 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 J3QT63 122 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 IFNA4P05014 189 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 FABP1P07148 127 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 WNT2P09544 360 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 OR8U9P0C7N5 309 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 LMO1P25800 156 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 CD80P33681 288 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 SNCAP37840 140 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 EWSR1Q01844 656 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TGIF1Q15583 401 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 HFEQ30201 348 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ZNF766Q5HY98 468 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TMEM178AQ8NBL3 297 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 OR5D13Q8NGL4 314 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 OR8U1Q8NH10 309 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 CABLES2Q9BTV7 478 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ST8SIA5O15466 376 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TSPAN15O95858 294 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ID4P47928 161 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ID3Q02535 119 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ESPL1Q14674 2120 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 HMGN3Q15651 99 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TBC1D28Q2M2D7 210 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ZNF324BQ6AW86 544 aaPredicted RBP12.74□□□□□ -0.37
SCFD2-201ENST00000388940 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 C20orf204Q6ZNR8 217 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 ESRP2Q9H6T0 727 aaKnown RBP12.74□□□□□ -0.37
SCFD2-201ENST00000388940 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
SCFD2-201ENST00000388940 NPIPB11E5RHQ5 1161 aa12.73□□□□□ -0.37
SCFD2-201ENST00000388940 HSPB6O14558 160 aa12.73□□□□□ -0.37
SCFD2-201ENST00000388940 PGLYRP1O75594 196 aaPredicted RBP12.73□□□□□ -0.37
SCFD2-201ENST00000388940 HLA-DRB3P79483 266 aa12.73□□□□□ -0.37
SCFD2-201ENST00000388940 Q6P435 159 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms