RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MYF6P23409 242 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 C21orf33P30042 268 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-201ENST00000381089 GLP1RP43220 463 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 TMED1Q13445 227 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 C17orf58Q2M2W7 97 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 C9orf66Q5T8R8 295 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 C18orf65Q6ZTR6 163 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 OR5M8Q8NGP6 311 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 OR8U1Q8NH10 309 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 COQ2Q96H96 371 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 RAB26Q9ULW5 256 aa12.63□□□□□ -0.39
VCX3A-201ENST00000381089 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 SLC33A1O00400 549 aaPredicted RBP12.62□□□□□ -0.39
VCX3A-201ENST00000381089 IGHG2P01859 326 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 ISG15P05161 165 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 KIR3DL2P43630 455 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 HNF4GQ14541 408 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 LAIR2Q6ISS4 152 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 STPG2Q8N412 459 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 OR5D18Q8NGL1 313 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 OR10X1Q8NGY0 326 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 LGALS12Q96DT0 336 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 CALYQ9NYX4 217 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 IDI2-AS1Q9NZ38 188 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 LINC00527Q9UJ94 153 aa12.62□□□□□ -0.39
VCX3A-201ENST00000381089 MEIKINA0A087WXM9 373 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 IGKV1-12A0A0C4DH73 117 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 A0A1W2PPI3 338 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 AP4M1O00189 453 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 IGKV1D-12P01611 117 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 MT-ND2P03891 347 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
VCX3A-201ENST00000381089 Q6P435 159 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 KCTD20Q7Z5Y7 419 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 OR51T1Q8NGJ9 327 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 OR13C3Q8NGS6 347 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 PPIL3Q9H2H8 161 aaKnown RBP12.61□□□□□ -0.39
VCX3A-201ENST00000381089 Q9H521 79 aa12.61□□□□□ -0.39
VCX3A-201ENST00000381089 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
VCX3A-201ENST00000381089 SIRT4Q9Y6E7 314 aaPredicted RBP12.61□□□□□ -0.39
VCX3A-201ENST00000381089 IL1AP01583 271 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 TMEM225BP0DP42 221 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 MTNR1BP49286 362 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 PAN3Q58A45 887 aaKnown RBP12.6□□□□□ -0.39
VCX3A-201ENST00000381089 OR13C9Q8NGT0 318 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 FBLIM1Q8WUP2 373 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 CPNE2Q96FN4 548 aaPredicted RBP12.6□□□□□ -0.39
VCX3A-201ENST00000381089 RAX2Q96IS3 184 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 DUX3Q96PT4 197 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 NCOR1P1Q9H4R4 102 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 PSG11Q9UQ72 335 aa12.6□□□□□ -0.39
VCX3A-201ENST00000381089 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
VCX3A-201ENST00000381089 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
VCX3A-201ENST00000381089 HSPB6O14558 160 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 IGHV3-7P01780 117 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 HCKP08631 526 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
VCX3A-201ENST00000381089 HTR1AP08908 422 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 ECI1P42126 302 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 GNG10P50151 68 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 LUMP51884 338 aaPredicted RBP12.59□□□□□ -0.39
VCX3A-201ENST00000381089 LTC4SQ16873 150 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 TGIF2LXQ8IUE1 241 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 OR10A7Q8NGE5 316 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 LEAP2Q969E1 77 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 PRR25Q96S07 402 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 ZCCHC4Q9H5U6 513 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 FRRS1LQ9P0K9 344 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 KIF25Q9UIL4 384 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 MYRFQ9Y2G1 1151 aa12.59□□□□□ -0.39
VCX3A-201ENST00000381089 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 HSD17B6O14756 317 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 CGB3P0DN86 165 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 CGB7P0DN87 165 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 CDX1P47902 265 aaPredicted RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 KCNJ3P48549 501 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 CCR9P51686 369 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 ZNF85Q03923 595 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 FOXE3Q13461 319 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 GPR50Q13585 617 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 C6orf141Q5SZD1 244 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms