RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 MPIG6BO95866 241 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 IGHV3-7P01780 117 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 CGB3P0DN86 165 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 CGB7P0DN87 165 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 TMEM11P17152 192 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 GNG10P50151 68 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 PPP3R1P63098 170 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 UTF1Q5T230 341 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 C10orf99Q6UWK7 81 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 DRAM1Q8N682 238 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 OR10A7Q8NGE5 316 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 OR51D1Q8NGF3 324 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 OR10K1Q8NGX5 313 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 OR10X1Q8NGY0 326 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 GPR148Q8TDV2 347 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 LEAP2Q969E1 77 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 MRPS18AQ9NVS2 196 aaKnown RBP13.7□□□□□ -0.22
HMGN1-204ENST00000380749 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A9PA6NNJ1 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 NPIPB11E5RHQ5 1161 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-204ENST00000380749 HTR3BO95264 441 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 SSTR5P35346 364 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 GTF2A1P52655 376 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-204ENST00000380749 SLC16A12Q6ZSM3 486 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 CHPT1Q8WUD6 406 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 RGP1Q92546 391 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-204ENST00000380749 DPF1Q92782 380 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 S100A13Q99584 98 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 DPCDQ9BVM2 203 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-204ENST00000380749 FAM118AQ9NWS6 357 aa13.69□□□□□ -0.22
HMGN1-204ENST00000380749 TENM3Q9P273 2699 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 FGF16O43320 207 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 CSTBP04080 98 aaKnown RBP13.68□□□□□ -0.22
HMGN1-204ENST00000380749 LIMS3P0CW19 117 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 LIMS4P0CW20 117 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
HMGN1-204ENST00000380749 CCDC58Q4VC31 144 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 NHLRC3Q5JS37 347 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 DDI2Q5TDH0 399 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 RPL22L1Q6P5R6 122 aaKnown RBP13.68□□□□□ -0.22
HMGN1-204ENST00000380749 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 Q8NFD4 153 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 RFESDQ8TAC1 157 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 METTL9Q9H1A3 318 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 IFT22Q9H7X7 185 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 TMEM138Q9NPI0 162 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 PAK1IP1Q9NWT1 392 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-204ENST00000380749 IL36GQ9NZH8 169 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 ST3GAL6Q9Y274 331 aa13.68□□□□□ -0.22
HMGN1-204ENST00000380749 NBEAL2Q6ZNJ1 2754 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 KMT2CQ8NEZ4 4911 aaKnown RBP13.67□□□□□ -0.22
HMGN1-204ENST00000380749 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 HSD17B6O14756 317 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 IGKV1D-33P01593 117 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 IGKV1-33P01594 117 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-204ENST00000380749 ASCL4Q6XD76 172 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 TMPRSS11AQ6ZMR5 421 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 SUMF2Q8NBJ7 301 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF555Q8NEP9 628 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 SLC29A1Q99808 456 aa13.67□□□□□ -0.22
HMGN1-204ENST00000380749 FGF20Q9NP95 211 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-204ENST00000380749 IRGMA1A4Y4 181 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 SERPINE3A8MV23 424 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 CDRT1O95170 752 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 SLC6A1P30531 599 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 RPL23AP62750 156 aaKnown RBP13.66□□□□□ -0.22
HMGN1-204ENST00000380749 SLC35B1P78383 322 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 LINC00482Q8N8I6 264 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 S100A14Q9HCY8 104 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 ING4Q9UNL4 249 aa13.66□□□□□ -0.22
HMGN1-204ENST00000380749 NUDT19A8MXV4 375 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 K7EIL1 84 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-204ENST00000380749 MYL12AP19105 171 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 GZMHP20718 246 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 SERPINA2P20848 420 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 DCKP27707 260 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 BDKRB2P30411 391 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF816Q0VGE8 651 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-204ENST00000380749 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 HNF4GQ14541 408 aa13.65□□□□□ -0.22
HMGN1-204ENST00000380749 MPV17LQ2QL34 196 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms