RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CELF2-AS1Q8N7Q2 184 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 RXFP4Q8TDU9 374 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 TMEM186Q96B77 213 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 PRDM14Q9GZV8 571 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 MRPS18AQ9NVS2 196 aaKnown RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 HS3ST3B1Q9Y662 390 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 MYO18AQ92614 2054 aaKnown RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 OR4C45A6NMZ5 311 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 CLDN34H7C241 214 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 DLL1O00548 723 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 PRSS23O95084 383 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 PRR27Q6MZM9 219 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 ABHD14AQ9BUJ0 271 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 SLC2A8Q9NY64 477 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 U3KQ87 197 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 SS18L1O75177 396 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 PPYP01298 95 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 MUC1P15941 1255 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 NPY1RP25929 384 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 HTR1DP28221 377 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 EIF4EBP2Q13542 120 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 LRRC75BQ2VPJ9 315 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 OR10G9Q8NGN4 311 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 OR10G7Q8NGN6 311 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 FZR1Q9UM11 496 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 MYH15Q9Y2K3 1946 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 HMSDA8MTL9 139 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 NKX2-8O15522 239 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 PI3P19957 117 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 P2RX3P56373 397 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 FGF12P61328 243 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 RPS4XP62701 263 aaKnown RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 TSPO2Q5TGU0 170 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 RTN4RL2Q86UN3 420 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 ZNF561Q8N587 486 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 SLC25A33Q9BSK2 321 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 LYRM2Q9NU23 88 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 TRBV5-3A0A0A0MS03 114 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 ANKRD20A5PA0PJZ0 165 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 B4DEV8 164 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 FAM90A26D6RGX4 464 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 KCNAB3O43448 404 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 APOBEC3AP31941 199 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 LSM11P83369 360 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 LGALSLQ3ZCW2 172 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-201ENST00000380701 HIKESHIQ53FT3 197 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 C10orf113Q5VZT2 155 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 OR9G1Q8NH87 305 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 TMEM190Q8WZ59 177 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 C14orf79Q96F83 325 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 METTL26Q96S19 204 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 WDR13Q9H1Z4 485 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 SMDT1Q9H4I9 107 aa6.26□□□□□ -1.41
CCDC171-201ENST00000380701 DEFB108AA8MXU0 73 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 BMPR1BO00238 502 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 PDE6DO43924 150 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 MPV17P39210 176 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 SULT1A1P50225 295 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 RBM11P57052 281 aaKnown RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 LOXL3P58215 753 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 OR10A7Q8NGE5 316 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 OR52M1Q8NGK5 317 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 MRPL30Q8TCC3 161 aaKnown RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 ANAPC16Q96DE5 110 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 CCL19Q99731 98 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 TINAGL1Q9GZM7 467 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 WSB1Q9Y6I7 421 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 ZNF831Q5JPB2 1677 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 ASPDHA6ND91 283 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 GLI4P10075 376 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 DHRS2Q13268 280 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 RPEL1Q2QD12 228 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 OR5C1Q8NGR4 320 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 ZPLD1Q8TCW7 415 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 AKIP1Q9NQ31 210 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 MMP26Q9NRE1 261 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 JPT1Q9UK76 154 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 A0A1B0GTL3 188 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 CST7O76096 145 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 COX6A1P12074 109 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 PTGDSP41222 190 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 RPS20P60866 119 aaKnown RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 TEPPQ6URK8 271 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 THSD4Q6ZMP0 1018 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 FAM90A1Q86YD7 464 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 HIGD1AQ9Y241 93 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 TNS1Q9HBL0 1735 aaKnown RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 GEMIN2O14893 280 aaKnown RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 RELQ04864 619 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 CXorf66Q5JRM2 361 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-201ENST00000380701 PCGF1Q9BSM1 259 aa6.25□□□□□ -1.41
CCDC171-201ENST00000380701 C19orf24Q9BVV8 132 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms