RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 FAM90A12PA8MX19 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A5PA8MXJ8 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A23PA8MXZ1 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 PHF1O43189 567 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 GOSR1O95249 250 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 IFNA21P01568 189 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A15PP0C7V4 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A13PP0C7W8 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A14PP0C7W9 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A24PP0C7X0 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 IGKV1-13P0DP09 117 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 GLP1RP43220 463 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 AKR1C2P52895 323 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 NAAAQ02083 359 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 AKR1C1Q04828 323 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 PMS2P11Q13670 270 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 ATRAIDQ6UW56 229 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 LIAT1Q6ZQX7 453 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 WDR86Q86TI4 376 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 SUMF2Q8NBJ7 301 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 RDH5Q92781 318 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 BSCL2Q96G97 398 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 GMPPAQ96IJ6 420 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 TRIB1Q96RU8 372 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 CLCF1Q9UBD9 225 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 DNAJB11Q9UBS4 358 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 MEMO1Q9Y316 297 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 AKAP13Q12802 2813 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 TRAV24A0A0B4J272 114 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 PET100P0DJ07 73 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 IDH3GP51553 393 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 UCP3P55916 312 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 HERV-K104P61576 105 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MEX3BQ6ZN04 569 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 BPIFCQ8NFQ6 507 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 OR2J1Q9GZK6 312 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 DNTTIP1Q9H147 329 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM100Q9NV29 134 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 A6NLC8 198 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 IGHG3P01860 377 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 APOC3P02656 99 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SELEP16581 610 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 CD82P27701 267 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 RPL12P30050 165 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 KCNJ3P48549 501 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 GNG3P63215 75 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF818PQ6ZRF7 136 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 LDLRAD3Q86YD5 345 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SLC35G3Q8N808 338 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SECTM1Q8WVN6 248 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 NANOS1Q8WY41 292 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 ERGIC1Q969X5 290 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 PRRX2Q99811 253 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 OR51I2Q9H344 312 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 OPA3Q9H6K4 179 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 PLA2G2EQ9NZK7 142 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 AMDHD2Q9Y303 409 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MPC1Q9Y5U8 109 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 RIF1Q5UIP0 2472 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 H7C1Q1 480 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 K7EPK0 472 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MPPED1O15442 326 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SMPD2O60906 423 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM33P57088 247 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 TBC1D28Q2M2D7 210 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MPV17LQ2QL34 196 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MST1LQ2TV78 715 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 Q6ZS49 121 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM71E2Q8N5Q1 922 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MRPL30Q8TCC3 161 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 MARC2Q969Z3 335 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 SUCNR1Q9BXA5 334 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 ZC4H2Q9NQZ6 224 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 FBXL17Q9UF56 701 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 ZDHHC8Q9ULC8 765 aa6.78□□□□□ -1.32
PDLIM5-204ENST00000380176 HEATR1Q9H583 2144 aaKnown RBP6.77□□□□□ -1.32
PDLIM5-204ENST00000380176 BSNQ9UPA5 3926 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TRAV39A0A0B4J263 110 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 C3orf85A0A1B0GTC6 90 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 NUPL2O15504 423 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 AGFG2O95081 481 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 PPP1CBP62140 327 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 IL24Q13007 206 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 KRTCAP3Q53RY4 240 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 SPIN3Q5JUX0 258 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 PXDC1Q5TGL8 231 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 VWA1Q6PCB0 445 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM214BQ7L5A3 538 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TBC1D26Q86UD7 250 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF573Q86YE8 665 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM58AQ8N1B3 248 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 GAPTQ8N292 157 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 CNEP1R1Q8N9A8 125 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms