RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 LPAR5Q9H1C0 372 aa18.33■□□□□ 0.52
SKI-201ENST00000378536 SF3B6Q9Y3B4 125 aaKnown RBP18.33■□□□□ 0.52
SKI-201ENST00000378536 COX7A2P2O60397 106 aa18.33■□□□□ 0.52
SKI-201ENST00000378536 OR7C2O60412 319 aa18.33■□□□□ 0.52
SKI-201ENST00000378536 SRP14P37108 136 aaKnown RBP18.33■□□□□ 0.52
SKI-201ENST00000378536 RPL31P62899 125 aaKnown RBP18.33■□□□□ 0.52
SKI-201ENST00000378536 EXOSC2Q13868 293 aaKnown RBP18.33■□□□□ 0.52
SKI-201ENST00000378536 SOX7Q9BT81 388 aa18.33■□□□□ 0.52
SKI-201ENST00000378536 DEPPQ9NTK1 212 aa18.33■□□□□ 0.52
SKI-201ENST00000378536 FCGR3AP08637 254 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 ENDOGQ14249 297 aaKnown RBP18.32■□□□□ 0.52
SKI-201ENST00000378536 TMEM104Q8NE00 496 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 AKR1E2Q96JD6 320 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 GPR137Q96N19 417 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 RPUSD3Q6P087 351 aaKnown RBP18.32■□□□□ 0.52
SKI-201ENST00000378536 RELL2Q8NC24 303 aaPredicted RBP18.32■□□□□ 0.52
SKI-201ENST00000378536 R3HDM4Q96D70 268 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 RTN4RQ9BZR6 473 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 CACNA1IQ9P0X4 2223 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 MGST3O14880 152 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 PIN1P1O15428 100 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 OR10J4P0C629 311 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 PRF1P14222 555 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 BRS3P32247 399 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 LHX2P50458 406 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 ADIRFQ15847 76 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 ZNF787Q6DD87 383 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 SLC25A42Q86VD7 318 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 CCL13Q99616 98 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 HES4Q9HCC6 221 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 UQCC1Q9NVA1 299 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 A0A1W2PP11 408 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 CPN1P15169 458 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 ASCL1P50553 236 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 CLDN18P56856 261 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 UBE2G1P62253 170 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 SLC2A9Q9NRM0 540 aa18.32■□□□□ 0.52
SKI-201ENST00000378536 IGKV1D-43A0A0B4J1Z2 117 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 MPC2O95563 127 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 CLEC3BP05452 202 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 OR2B8PP59922 312 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 TIMM23BQ5SRD1 257 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 NUDT16L1Q9BRJ7 211 aaKnown RBP18.31■□□□□ 0.52
SKI-201ENST00000378536 FOXD3Q9UJU5 478 aaPredicted RBP18.31■□□□□ 0.52
SKI-201ENST00000378536 SPTA1P02549 2419 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 PLA2G10O15496 165 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 SYNGR1O43759 233 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 LANCL1O43813 399 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 NEURL1O76050 574 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 HAGHQ16775 308 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 ZNF826PQ6ZT77 177 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 SPACA3Q8IXA5 215 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 ZBTB34Q8NCN2 500 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 MOB3AQ96BX8 217 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 LIAT1Q6ZQX7 453 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 PIPOXQ9P0Z9 390 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 CRYBA1P05813 215 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 NRN1LQ496H8 165 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 OR5M8Q8NGP6 311 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A10PA6NDY2 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A18PA6NE21 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A16PA6NEW6 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A20PA6NIJ5 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A8PA6NJQ4 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A7PA6NKC0 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A22PA8MWA6 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A12PA8MX19 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A5PA8MXJ8 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A23PA8MXZ1 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 ADAP1O75689 374 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 OR2H2O95918 312 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A15PP0C7V4 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A13PP0C7W8 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A14PP0C7W9 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 FAM90A24PP0C7X0 464 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 OPRK1P41145 380 aa18.31■□□□□ 0.52
SKI-201ENST00000378536 RRASP10301 218 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 ETFRF1Q6IPR1 90 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 MRGPRGQ86SM5 289 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 TGIF2LYQ8IUE0 185 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 TGIF2LXQ8IUE1 241 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 ZNF680Q8NEM1 530 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 MISP3Q96FF7 219 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 LOC390937A0A1W2PQ73 354 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 IFNL4K9M1U5 179 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 SLC38A11Q08AI6 406 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 ACSF3Q4G176 576 aaPredicted RBP18.3■□□□□ 0.52
SKI-201ENST00000378536 PPP1R3EQ9H7J1 279 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 A0A1W2PN81 502 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 CHRNA7P36544 502 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 PRSS54Q6PEW0 395 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 SMIM15Q7Z3B0 74 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 HSD17B10Q99714 261 aaKnown RBP18.3■□□□□ 0.52
SKI-201ENST00000378536 KPTNQ9Y664 436 aa18.3■□□□□ 0.52
SKI-201ENST00000378536 PRR13Q9NZ81 148 aa18.29■□□□□ 0.52
SKI-201ENST00000378536 CST4P01036 141 aa18.29■□□□□ 0.52
SKI-201ENST00000378536 NAT2P11245 290 aa18.29■□□□□ 0.52
SKI-201ENST00000378536 KCNMB1Q16558 191 aa18.29■□□□□ 0.52
SKI-201ENST00000378536 HIST2H3PS2Q5TEC6 136 aa18.29■□□□□ 0.52
SKI-201ENST00000378536 ABLIM2Q6H8Q1 611 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms