RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 B3GALNT1O75752 331 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 FHITP49789 147 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 BLOC1S1P78537 153 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 KIAA0141Q14154 515 aaPredicted RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 HES1Q14469 280 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 PLA2G2CQ5R387 149 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 GGNBP1Q5YKI7 109 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 RPL7L1Q6DKI1 246 aaKnown RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 LILRB1Q8NHL6 650 aaPredicted RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 UQCC2Q9BRT2 126 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 SLC2A9Q9NRM0 540 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 ZMAT5Q9UDW3 170 aaKnown RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 HELZ2Q9BYK8 2649 aaKnown RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 FCGR3BO75015 233 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 OR13C7P0DN81 318 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 PVALBP20472 110 aaPredicted RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 BTG1P62324 171 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 RUNX1Q01196 453 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 FGL1Q08830 312 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 HAGHQ16775 308 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM128Q5BJH2 165 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 KRBOX4Q5JUW0 171 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 ZNF626Q68DY1 528 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 RTL6Q6ICC9 239 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 TGIF2LYQ8IUE0 185 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 CCDC36Q8IYA8 594 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 SLC38A6Q8IZM9 456 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 SPSB1Q96BD6 273 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 C5orf66Q9H5L9 145 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 PNRC2Q9NPJ4 139 aaKnown RBP6.94□□□□□ -1.3
CKAP2-203ENST00000378037 GLS2Q9UI32 602 aa6.94□□□□□ -1.3
CKAP2-203ENST00000378037 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 ZFP92A6NM28 416 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 M0R1X1 148 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 AQP7O14520 342 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 IFNA10P01566 189 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 FAM189A2Q15884 450 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 LINC00299Q6ZSB3 139 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 FGFRL1Q8N441 504 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 C9orf62Q8N4C0 152 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 RPH3ALQ9UNE2 315 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 IGHV3OR16-10A0A075B7F0 116 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 SH2D1BO14796 132 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 MELTFP08582 738 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 FCGR3AP08637 254 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 CEACAM1P13688 526 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 CD24P25063 80 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 TNFAIP6P98066 277 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 NHLH2Q02577 135 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 KCNRGQ8N5I3 272 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM229BQ8NBD8 167 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 C22orf15Q8WYQ4 148 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 SLC25A32Q9H2D1 315 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 METRNQ9UJH8 293 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 PUS1Q9Y606 427 aaKnown RBP eCLIP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 PRRC2AP48634 2157 aaKnown RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 A0A1B0GW55 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 ACTL6BO94805 426 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 MPC2O95563 127 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 ACTL6AO96019 429 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 PPYP01298 95 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L2P0CJ85 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L3P0CJ86 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L4P0CJ87 422 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L5P0CJ88 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L6P0CJ89 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L7P0CJ90 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DEFA4P12838 97 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 FAM76BQ5HYJ3 339 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 CXorf66Q5JRM2 361 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 RPUSD3Q6P087 351 aaKnown RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 TEX261Q6UWH6 196 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 TBC1D26Q86UD7 250 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 UBAC2Q8NBM4 344 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 RNF166Q96A37 237 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 PLK3Q9H4B4 646 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 AURKAIP1Q9NWT8 199 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4Q9UBX2 424 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 TIMM8BQ9Y5J9 83 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-203ENST00000378037 U3KQ87 197 aa6.93□□□□□ -1.3
CKAP2-203ENST00000378037 ERVH48-1M5A8F1 160 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 TOR1AO14656 332 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 GPR37O15354 613 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 OR2H2O95918 312 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 SNRNP70P08621 437 aaKnown RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 PSG2P11465 335 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM11P17152 192 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 ZNF133P52736 654 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 KLF3P57682 345 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 PXDC1Q5TGL8 231 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 C11orf87Q6NUJ2 197 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 PIK3IP1Q96FE7 263 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 GMPPAQ96IJ6 420 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms