RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FAM24AA6NFZ4 105 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 TRIM77I1YAP6 450 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 DLL1O00548 723 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 ASCL1P50553 236 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 ATP1A1-AS1Q5TC04 95 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 CLEC18BQ6UXF7 455 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 PIPOXQ9P0Z9 390 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 PRSS50Q9UI38 385 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 NCR3LG1Q68D85 454 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 OR4F17Q8NGA8 305 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 FAM157AC9JC47 383 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 TGOLN2O43493 480 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 CTRB1P17538 263 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 TNXAQ16473 311 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 CTRB2Q6GPI1 263 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 GAPTQ8N292 157 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 HSD17B10Q99714 261 aaKnown RBP15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 SLC45A2Q9UMX9 530 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 MYOFQ9NZM1 2061 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 OR1K1Q8NGR3 316 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 SIRT4Q9Y6E7 314 aaPredicted RBP15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 GRAMD2BQ96HH9 432 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 K7ESF4 209 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 PRF1P14222 555 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 GPR6P46095 362 aaPredicted RBP15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 APCDD1LQ8NCL9 501 aa15.57■□□□□ 0.08
CLSTN1-202ENST00000377298 SYNGR2O43760 224 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 PRDX2P32119 198 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 IL24Q13007 206 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 GPR137Q96N19 417 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 C12orf57Q99622 126 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 RHOFQ9HBH0 211 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 CCL28Q9NRJ3 127 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 FAM186AA6NE01 2351 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 CD200P41217 278 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 NUBP1P53384 320 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 HOGA1Q86XE5 327 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 TMEM105Q8N8V8 129 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 IGKV3D-11A0A0A0MRZ8 115 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 NPIPB13A6NJU9 1138 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 NPIPB4C9JG80 1138 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 PHYHD1Q5SRE7 291 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 ZMIZ1Q9ULJ6 1067 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 IGKV1D-42A0A075B6H8 117 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 SLC25A42Q86VD7 318 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 SLC2A9Q9NRM0 540 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 SLC25A10Q9UBX3 287 aaPredicted RBP15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 INSIG2Q9Y5U4 225 aa15.56■□□□□ 0.08
CLSTN1-202ENST00000377298 RALGAPA2Q2PPJ7 1873 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 PLA2G10O15496 165 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 ADAP1O75689 374 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 COX5BP10606 129 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 CCL8P80075 99 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 PJVKQ0ZLH3 352 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 OR5I1Q13606 314 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 ZCCHC14Q8WYQ9 949 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 SFXN3Q9BWM7 321 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 TRBV5-5A0A0J9YX44 114 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 LRRC3CA6NJW4 275 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 HMSDA8MTL9 139 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 ISG15P05161 165 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 RPL31P62899 125 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 NFAM1Q8NET5 270 aaPredicted RBP15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 PRR19A6NJB7 356 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 RPS4XP62701 263 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 RFLNBQ8N5W9 214 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 ADAMTS17Q8TE56 1095 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 KCNMB2Q9Y691 235 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 LGALS7P47929 136 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 RHOBP62745 196 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 ZNF79Q15937 498 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 C19orf48Q6RUI8 117 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 CABLES2Q9BTV7 478 aa15.55■□□□□ 0.08
CLSTN1-202ENST00000377298 IGHV3OR15-7A0A075B7D8 119 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 MGST3O14880 152 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 POLR2GP62487 172 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 AESQ08117 197 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 CLEC2AQ6UVW9 174 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 OR1L4Q8NGR5 311 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 LIPGQ9Y5X9 500 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 CRHP06850 196 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 FGF12P61328 243 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 RASL11BQ9BPW5 248 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 V9GYS6 101 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 DNASE2O00115 360 aaPredicted RBP15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 OPN1MWP04001 364 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 S100A8P05109 93 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 OPN1MW2P0DN77 364 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 OPN1MW3P0DN78 364 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 NQO2P16083 231 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 S100A4P26447 101 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 KLF9Q13886 244 aaPredicted RBP15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 UQCC3Q6UW78 93 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 FLYWCH2Q96CP2 140 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 PRNDQ9UKY0 176 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 LEUTXA8MZ59 168 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 ADAM10O14672 748 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 EFNB2P52799 333 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 FNDC7Q5VTL7 733 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 PRR27Q6MZM9 219 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms