RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 KIR2DS4P43632 304 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PIGPP57054 158 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 HERV-K104P61576 105 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 SORDQ00796 357 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 KIR2DS1Q14954 304 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ANKRD55Q3KP44 614 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 LRRC37A5PQ49AS3 106 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ABCA11PQ4W5N1 156 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PHLDA2Q53GA4 152 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PRR18Q8N4B5 295 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 GLS2Q9UI32 602 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 SPTA1P02549 2419 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 IGLV3-9A0A075B6K5 115 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 FXYD6-FXYD2A0A087WZ82 144 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 A0A1B0GWJ7 208 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 C5orf51A6NDU8 294 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 FAM90A27PA6NNH2 459 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 PTBP3O95758 552 aaKnown RBP10.9□□□□□ -0.66
TRIM40-206ENST00000376724 TK1P04183 234 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 ZNF81P51508 661 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 HERPUD1Q15011 391 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIM40-206ENST00000376724 TEX261Q6UWH6 196 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 Q6ZS49 121 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 PRORYQ9H606 182 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 DECR2Q9NUI1 292 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 COQ3Q9NZJ6 369 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 U3KQ87 197 aa10.9□□□□□ -0.66
TRIM40-206ENST00000376724 RFPL4AA6NLU0 287 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 RFPL4AL1F8VTS6 287 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 PSPNO60542 156 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ADAP1O75689 374 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 PPYP01298 95 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 RPS2P15880 293 aaKnown RBP10.89□□□□□ -0.67
TRIM40-206ENST00000376724 MDH2P40926 338 aaKnown RBP10.89□□□□□ -0.67
TRIM40-206ENST00000376724 CD200P41217 278 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ADAM5Q6NVV9 412 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 MOGAT3Q86VF5 341 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 COQ8AQ8NI60 647 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 UBALD1Q8TB05 177 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 IL1F10Q8WWZ1 152 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 MOB3AQ96BX8 217 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ATRXP46100 2492 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 IGKV1-6A0A0C4DH72 117 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ARPC5O15511 151 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 DIRAS3O95661 229 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 IFNA2P01563 188 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 SERPINF1P36955 418 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 AANATQ16613 207 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 SMIM21Q3B7S5 101 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 LPCAT3Q6P1A2 487 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 OR8H3Q8N146 312 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 OR11L1Q8NGX0 322 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 OR10Z1Q8NGY1 313 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 ITLN1Q8WWA0 313 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
TRIM40-206ENST00000376724 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
TRIM40-206ENST00000376724 METTL8Q9H825 291 aaKnown RBP10.89□□□□□ -0.67
TRIM40-206ENST00000376724 CHD3Q12873 2000 aaKnown RBP10.88□□□□□ -0.67
TRIM40-206ENST00000376724 TRBV6-6A0A0A6YYG2 114 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 NKX2-6A6NCS4 301 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 RGS11O94810 467 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 EGR1P18146 543 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 HLA-DRB3P79483 266 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 SP6Q3SY56 376 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 SECTM1Q8WVN6 248 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 RTN4IP1Q8WWV3 396 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-206ENST00000376724 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 RASL12Q9NYN1 266 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 COMMD9Q9P000 198 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
TRIM40-206ENST00000376724 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
TRIM40-206ENST00000376724 TOR1AO14656 332 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 NDUFA2O43678 99 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 HOXB5P09067 269 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 HLA-GP17693 338 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 CXCL2P19875 107 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 ASCL1P50553 236 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 COL10A1Q03692 680 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 AESQ08117 197 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 GSG1LQ6UXU4 331 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 ASB13Q8WXK3 278 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 RDH8Q9NYR8 311 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 SHANK1Q9Y566 2161 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 TRAV14DV4A0A0A6YYC5 116 aa10.87□□□□□ -0.67
TRIM40-206ENST00000376724 MED19A0JLT2 244 aaPredicted RBP10.87□□□□□ -0.67
TRIM40-206ENST00000376724 MPTX1A8MV57 137 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms