RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ASCL3Q9NQ33 180 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 KCNE3Q9Y6H6 103 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 CTAG2O75638 210 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
VPS13A-204ENST00000376634 CDRT15L2A8MXV6 281 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 RNF224P0DH78 156 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ZFP30Q9Y2G7 519 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 H7C2G1 150 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ERVS71-1P61550 626 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TWIST1Q15672 202 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 GBGT1Q8N5D6 347 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 OR2C3Q8N628 320 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 MMP25Q9NPA2 562 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 FMODQ06828 376 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ANKRD33Q7Z3H0 272 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ANGPTL4Q9BY76 406 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 IGHV3-43A0A0B4J1X8 118 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 J3KRW8 73 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 IGHV3-43DP0DP04 118 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 YBX1P67809 324 aaKnown RBP11.06□□□□□ -0.64
VPS13A-204ENST00000376634 GNRHR2Q96P88 292 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 DIRC2Q96SL1 478 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 COX19Q49B96 90 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 GLRX2Q9NS18 164 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 STARD10Q9Y365 291 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TCTN1Q2MV58 587 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 C10orf113Q5VZT2 155 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TMEM179BQ7Z7N9 219 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 MPC2O95563 127 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ETHE1O95571 254 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 EPPINO95925 133 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 IGHV3-13P01766 116 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 IGHV3-7P01780 117 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 INHBBP09529 407 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 LINC00615Q96LM1 132 aaPredicted RBP11.06□□□□□ -0.64
VPS13A-204ENST00000376634 LMX1BO60663 402 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 SPNP16150 400 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ACAA1P09110 424 aaPredicted RBP11.06□□□□□ -0.64
VPS13A-204ENST00000376634 FOXO1Q12778 655 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 WIPI1Q5MNZ9 446 aaPredicted RBP11.06□□□□□ -0.64
VPS13A-204ENST00000376634 LSMEM1Q8N8F7 131 aa11.06□□□□□ -0.64
VPS13A-204ENST00000376634 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
VPS13A-204ENST00000376634 MUC20Q8N307 709 aaPredicted RBP11.05□□□□□ -0.64
VPS13A-204ENST00000376634 MZB1Q8WU39 189 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 SORL1Q92673 2214 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 TCRBV5S2A0A599 114 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 SS18L1O75177 396 aaPredicted RBP11.05□□□□□ -0.64
VPS13A-204ENST00000376634 ACVR1Q04771 509 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 WDR38Q5JTN6 314 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 BRWD3Q6RI45 1802 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 CXorf1O96002 111 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 COX6CP09669 75 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF117Q03924 483 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 MUC15Q8N387 334 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 PGA4P0DJD7 388 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 PGA5P0DJD9 388 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 ANKRD55Q3KP44 614 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 RIMKLAQ8IXN7 391 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 RPS4Y2Q8TD47 263 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 DHRS7CA6NNS2 312 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 IL20Q9NYY1 176 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 TCF21O43680 179 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 IGLV3-27P01718 113 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 GZMKP49863 264 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 GPR27Q9NS67 375 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 LIPGQ9Y5X9 500 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 ID4P47928 161 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 FAM131CQ96AQ9 280 aa11.05□□□□□ -0.64
VPS13A-204ENST00000376634 IL24Q13007 206 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SRSF10O75494 262 aaKnown RBP11.04□□□□□ -0.64
VPS13A-204ENST00000376634 ZFPL1O95159 310 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 FAM219AQ8IW50 185 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 ORAI1Q96D31 301 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 MED19A0JLT2 244 aaPredicted RBP11.04□□□□□ -0.64
VPS13A-204ENST00000376634 OR10J1P30954 320 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 TCTAP57738 103 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 OR4P4Q8NGL7 312 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 OR8D4Q8NGM9 314 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 EID2BQ96D98 161 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 IGKV3-7A0A075B6H7 116 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 METAP1P53582 386 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 TCL1AP56279 114 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms