RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RAB5CP51148 216 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DENND4AQ7Z401 1863 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR5B12Q96R08 314 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CABLES2Q9BTV7 478 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ABCA4P78363 2273 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR6C6A6NF89 314 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 P2RY1P47900 373 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 UBE2NP61088 152 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DCAF12Q5T6F0 453 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM252Q8N6L7 170 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 APH1AQ96BI3 265 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RAB39BQ96DA2 213 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 LIME1Q9H400 295 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 UCK1Q9HA47 277 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 STARD10Q9Y365 291 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMED3Q9Y3Q3 217 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 MST1LQ2TV78 715 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ALKBH6Q3KRA9 238 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DTX1Q86Y01 620 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SNX22Q96L94 193 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZNF665Q9H7R5 613 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SLC25A22Q9H936 323 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CDH20Q9HBT6 801 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM38BQ9NVV0 291 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PSENENQ9NZ42 101 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGKV1-12A0A0C4DH73 117 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 A0A1B0GTQ1 180 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SHISA7A6NL88 538 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGKV1D-12P01611 117 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SNCAP37840 140 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RAC3P60763 192 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CLN3Q13286 438 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR2H1Q9GZK4 316 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 F8VVB4 439 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 F8VWA3 439 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PSG2P11465 335 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 A0A1W2PNV4 684 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM187Q14656 261 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HIKESHIQ53FT3 197 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR10V1Q8NGI7 309 aa12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 C1orf147Q96MC9 270 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 BOKQ9UMX3 212 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TGIF2-C20orf24A0A0A6YYL0 155 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 AP4M1O00189 453 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TRGC2P03986 189 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CELA3AP09093 270 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RAC2P15153 192 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 EIF2S3P41091 472 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SUCLG1P53597 346 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RND3P61587 244 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 FAM27BQ5VT28 67 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RHOVQ96L33 236 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SMIM7Q9BQ49 75 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GAR1Q9NY12 217 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 KCNIP1Q9NZI2 227 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CARHSP1Q9Y2V2 147 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGSF23A1L1A6 192 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 S100A8P05109 93 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HLA-GP17693 338 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 FABP6P51161 128 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SURF2Q15527 256 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 BATFQ16520 125 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GPR61Q9BZJ8 451 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 STRAPQ9Y3F4 350 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 KIR2DS1A0A191URI9 304 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZIC3O60481 467 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 KIR2DS4P43632 304 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 KIR2DS1Q14954 304 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR4F5Q8NH21 305 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SMIM8Q96KF7 97 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR4F4Q96R69 305 aa12.42□□□□□ -0.42
TNFRSF1B-201ENST00000376259 A0A0U1RQV5 110 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DBX1A6NMT0 343 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CEBPDP49716 269 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DUSP3P51452 185 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ERVS71-1P61550 626 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HGFACQ04756 655 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMPRSS7Q7RTY8 843 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 COLCA2A8K830 154 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PROB1E7EW31 1015 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 MAGEA5P43359 124 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 RBM11P57052 281 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 S100A12P80511 92 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms