RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SH2D1BO14796 132 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 DEGS1O15121 323 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 NPFFO15130 113 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 CRTAPO75718 401 aaPredicted RBP9.89□□□□□ -0.83
LSM2-208ENST00000375661 GABARAPO95166 117 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 BPNT1O95861 308 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 PAHP00439 452 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 TK1P04183 234 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 SLC2A2P11168 524 aaPredicted RBP9.89□□□□□ -0.83
LSM2-208ENST00000375661 GTF2F2P13984 249 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 CAPZA1P52907 286 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
LSM2-208ENST00000375661 LOXL3P58215 753 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 NCS1P62166 190 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 MXD1Q05195 221 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 UNC119Q13432 240 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 CTF1Q16619 201 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 GPR107Q5VW38 600 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 OR4S1Q8NGB4 309 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 OR51D1Q8NGF3 324 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 CFHR4Q92496 578 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 FAM46BQ96A09 425 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 MRPS24Q96EL2 167 aaKnown RBP9.89□□□□□ -0.83
LSM2-208ENST00000375661 FAM234AQ9H0X4 552 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 RANBP3Q9H6Z4 567 aaPredicted RBP9.89□□□□□ -0.83
LSM2-208ENST00000375661 PCDHB16Q9NRJ7 776 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 STEAP1Q9UHE8 339 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 GLS2Q9UI32 602 aa9.89□□□□□ -0.83
LSM2-208ENST00000375661 A0A0B4J203 849 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 TRAV24A0A0B4J272 114 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 SLC33A1O00400 549 aaPredicted RBP9.88□□□□□ -0.83
LSM2-208ENST00000375661 GEMIN2O14893 280 aaKnown RBP9.88□□□□□ -0.83
LSM2-208ENST00000375661 MPIG6BO95866 241 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 ZNF44P15621 663 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 ARSBP15848 533 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 MGMTP16455 207 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 NDUFB7P17568 137 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 RPS19P39019 145 aaKnown RBP9.88□□□□□ -0.83
LSM2-208ENST00000375661 KIR2DS4P43632 304 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 OR3A1P47881 315 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 EFNB2P52799 333 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 VBP1P61758 197 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 SCN1BQ07699 218 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 PLA2G7Q13093 441 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 C2orf76Q3KRA6 126 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 C1orf122Q6ZSJ8 110 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 ASCC1Q8N9N2 400 aaKnown RBP9.88□□□□□ -0.83
LSM2-208ENST00000375661 MRAPQ8TCY5 172 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 FAM3DQ96BQ1 224 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 CYYR1Q96J86 154 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 Q96M66 194 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 DCTN5Q9BTE1 182 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 SELENOIQ9C0D9 397 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 CHST6Q9GZX3 395 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 CST11Q9H112 138 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 PPA2Q9H2U2 334 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 IFT22Q9H7X7 185 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 ONECUT1Q9UBC0 465 aa9.88□□□□□ -0.83
LSM2-208ENST00000375661 A0A0A6YYD4 124 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 TMEM272A0A1B0GTI8 110 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 GABRR1P24046 479 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 UBE2E1P51965 193 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 RPS27AP62979 156 aaKnown RBP9.87□□□□□ -0.83
LSM2-208ENST00000375661 MPV17LQ2QL34 196 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 NCR3LG1Q68D85 454 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 SIGIRRQ6IA17 410 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 SFXN4Q6P4A7 337 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 OR2W3Q7Z3T1 314 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 LINC00596Q86U02 117 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 CLVS1Q8IUQ0 354 aaPredicted RBP9.87□□□□□ -0.83
LSM2-208ENST00000375661 OR8H2Q8N162 312 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 Q8N7P7 452 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 CHST4Q8NCG5 386 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 BEND2Q8NDZ0 799 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 KCNG3Q8TAE7 436 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 TM2D1Q9BX74 207 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 LPAR5Q9H1C0 372 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 RAB18Q9NP72 206 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 SIRT7Q9NRC8 400 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 C19orf12Q9NSK7 152 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 NECAP2Q9NVZ3 263 aa9.87□□□□□ -0.83
LSM2-208ENST00000375661 M0R1W7 72 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 MGST3O14880 152 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 OR7C1O76099 320 aaPredicted RBP9.86□□□□□ -0.83
LSM2-208ENST00000375661 IL1AP01583 271 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 SAA4P35542 130 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 SERPINB10P48595 397 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 GRK1Q15835 563 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 AANATQ16613 207 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 SUMF2Q8NBJ7 301 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 OR4M1Q8NGD0 313 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 OR5D13Q8NGL4 314 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 OR2T6Q8NHC8 308 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 PPP1R35Q8TAP8 253 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 H1FXQ92522 213 aaKnown RBP9.86□□□□□ -0.83
LSM2-208ENST00000375661 TNFRSF14Q92956 283 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 NICN1Q9BSH3 213 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms