RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 ABCG5Q9H222 651 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 IGHV1-3A0A0C4DH29 117 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 IGKV1-12A0A0C4DH73 117 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 IGKV1D-12P01611 117 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 DAPP51397 102 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 FAHD1Q6P587 224 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 OR2G2Q8NGZ5 317 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 EAF1Q96JC9 268 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-202ENST00000375271 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-202ENST00000375271 OSBPL10Q9BXB5 764 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 FAM192AQ9GZU8 254 aa11.08□□□□□ -0.64
PTCH1-202ENST00000375271 A0A1W2PPE3 182 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 G3V2T6 193 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 MOSP00540 346 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 SSTR5P35346 364 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 SOX6P35712 828 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 KIR3DL2P43630 455 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 KCNJ3P48549 501 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 ZNF816Q0VGE8 651 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-202ENST00000375271 DIAPH2-AS1Q14236 149 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 C12orf73Q69YU5 71 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 Q6P435 159 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 KCTD20Q7Z5Y7 419 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 IZUMO1Q8IYV9 350 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 OR8H1Q8NGG4 311 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 MBOAT4Q96T53 435 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 GHITMQ9H3K2 345 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 ISYNA1Q9NPH2 558 aa11.07□□□□□ -0.64
PTCH1-202ENST00000375271 DAPL1A0PJW8 107 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 TXNL1O43396 289 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 MITFO75030 526 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-202ENST00000375271 SAP30O75446 220 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 MT-ND2P03891 347 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 ISG15P05161 165 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 RPSAP08865 295 aaKnown RBP11.06□□□□□ -0.64
PTCH1-202ENST00000375271 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-202ENST00000375271 ZNF616Q08AN1 781 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 TMED1Q13445 227 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 RSU1Q15404 277 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 DNAL1Q4LDG9 190 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 UTF1Q5T230 341 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 ZDHHC13Q8IUH4 622 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 OR5D14Q8NGL3 314 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 NEK7Q8TDX7 302 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 TSEN15Q8WW01 171 aaKnown RBP11.06□□□□□ -0.64
PTCH1-202ENST00000375271 NCOR1P1Q9H4R4 102 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 RAB9BQ9NP90 201 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 IMPAD1Q9NX62 359 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 SCOCQ9UIL1 159 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 MYRFQ9Y2G1 1151 aa11.06□□□□□ -0.64
PTCH1-202ENST00000375271 LCE6AA0A183 80 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 SDCBPO00560 298 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-202ENST00000375271 IGHG4P01861 327 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 CSTBP04080 98 aaKnown RBP11.05□□□□□ -0.64
PTCH1-202ENST00000375271 CD1BP29016 333 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 KISS1Q15726 138 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 ZSCAN26Q16670 478 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 ZNF691Q5VV52 312 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 LPCAT4Q643R3 524 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 SATL1Q86VE3 508 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 Q8N9W7 124 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 OR8J1Q8NGP2 316 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 OR1N2Q8NGR9 330 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 ISOC1Q96CN7 298 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 S1PR3Q99500 378 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 S100A13Q99584 98 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 VSIG4Q9Y279 399 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 STAB2Q8WWQ8 2551 aa11.05□□□□□ -0.64
PTCH1-202ENST00000375271 TMEM30CPA0ZSE6 113 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 OVOL1O14753 267 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 GYG2O15488 501 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 SULT1B1O43704 296 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 GZMHP20718 246 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 ZP1P60852 638 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 ISL1P61371 349 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 FHL3Q13643 280 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 EBI3Q14213 229 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 IL13RA2Q14627 380 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 CDK5R1Q15078 307 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 SERPINA12Q8IW75 414 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 OR6Q1Q8NGQ2 317 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 TNFAIP8L1Q8WVP5 186 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 KCTD7Q96MP8 289 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 OR5B12Q96R08 314 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 RIBC2Q9H4K1 309 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 FRRS1LQ9P0K9 344 aa11.04□□□□□ -0.64
PTCH1-202ENST00000375271 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms