RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MSL2Q9HCI7 577 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RDH8Q9NYR8 311 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 UBQLN2Q9UHD9 624 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PCDHB10Q9UN67 800 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 KCNIP3Q9Y2W7 256 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MAB21L2Q9Y586 359 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CADP27708 2225 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TRBV6-7A0A0A0MS04 114 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IGKV1-6A0A0C4DH72 117 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 NPIPB11E5RHQ5 1161 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C3orf80F5H4A9 247 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 LMO1P25800 156 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 KCNJ3P48549 501 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FAM27E3Q08E93 113 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TMEM187Q14656 261 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MSMPQ1L6U9 139 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 WDR82Q6UXN9 313 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 KCNRGQ8N5I3 272 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 THAP6Q8TBB0 222 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 METTL8Q9H825 291 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ASF1BQ9NVP2 202 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RAXQ9Y2V3 346 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IGLV3-9A0A075B6K5 115 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SIRPB1O00241 398 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HAND1O96004 215 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CFDP00746 253 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RND3P61587 244 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RPS23P62266 143 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RBPJQ06330 500 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IL15RAQ13261 267 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 LRRC37A5PQ49AS3 106 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PRR30Q53SZ7 412 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PCSK4Q6UW60 755 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SSX8Q7RTT4 187 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 OR5T2Q8NGG2 359 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PRR7Q8TB68 274 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GLS2Q9UI32 602 aa15.21■□□□□ 0.03
HLA-DQB1-201ENST00000374943 BET1O15155 118 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LYL1P12980 280 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PRAMEF6Q5VXH4 476 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ACP7Q6ZNF0 438 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ZNF826PQ6ZT77 177 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ACOT7LQ6ZUV0 252 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 RELL2Q8NC24 303 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PLPPR1Q8TBJ4 325 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR10C1Q96KK4 312 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MBD2Q9UBB5 411 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ATRXP46100 2492 aa15.2■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TLN1Q9Y490 2541 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 RNF222A6NCQ9 220 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TUBAL3A6NHL2 446 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 A6NLC8 198 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ERVH48-1M5A8F1 160 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR5AC1P0C628 307 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 KLF3P57682 345 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PHLDA2Q53GA4 152 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LDLRAD3Q86YD5 345 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TMEM171Q8WVE6 324 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MBNL3Q9NUK0 354 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MEMO1Q9Y316 297 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 WIPI2Q9Y4P8 454 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IGHV3-64DA0A0J9YX35 117 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 C16orf97H3BN30 126 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 B3GALNT1O75752 331 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 HOXB5P09067 269 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 RCC1P18754 421 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 GNRHRP30968 328 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SMIM21Q3B7S5 101 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LIAT1Q6ZQX7 453 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SLC51BQ86UW2 128 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 LRP11Q86VZ4 500 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR10Z1Q8NGY1 313 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 TAAR3PQ9P1P4 343 aa15.19■□□□□ 0.02
HLA-DQB1-201ENST00000374943 RPS10-NUDT3A0A1W2PQS6 291 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ATP6V1G2-DDX39BF2Z307 99 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IFNL4K9M1U5 179 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 GPR31O00270 319 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 IFNA21P01568 189 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 CD40P25942 277 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 CFHR2P36980 270 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 CLLU1Q5K131 121 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 C5orf24Q7Z6I8 188 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 H1FOOQ8IZA3 346 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 NUP37Q8NFH4 326 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR2Z1Q8NG97 314 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR11L1Q8NGX0 322 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 RNF126Q9BV68 326 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 DUSP13Q9UII6 198 aa15.18■□□□□ 0.02
HLA-DQB1-201ENST00000374943 WNT9BO14905 357 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 MPPED1O15442 326 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 BCL2L11O43521 198 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PET100P0DJ07 73 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 SRPXP78539 464 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 HMGN3Q15651 99 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 ALKBH2Q6NS38 261 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 PRSS54Q6PEW0 395 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 C22orf34Q6ZV56 151 aa15.17■□□□□ 0.02
HLA-DQB1-201ENST00000374943 OR8H3Q8N146 312 aa15.17■□□□□ 0.02
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