RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SCARB1Q8WTV0 552 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 RRNAD1Q96FB5 475 aaKnown RBP16.57■□□□□ 0.24
HDAC1-201ENST00000373548 TREM2Q9NZC2 230 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 OR5AC2Q9NZP5 309 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 CADP27708 2225 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 ATMQ13315 3056 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 IGKV1D-13A0A0B4J2D9 117 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 TUBAL3A6NHL2 446 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 PRRG2O14669 202 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 SH2D1BO14796 132 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 WNT9BO14905 357 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 IGKV1-13P0DP09 117 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 BMP5P22003 454 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 IAH1Q2TAA2 248 aaPredicted RBP16.56■□□□□ 0.24
HDAC1-201ENST00000373548 C3orf36Q3SXR2 165 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 PRSS54Q6PEW0 395 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 SPERTQ8NA61 448 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 OR4A4PQ8NGN8 299 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 GLYATL2Q8WU03 294 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 MUCL1Q96DR8 90 aa16.56■□□□□ 0.24
HDAC1-201ENST00000373548 A6NLC8 198 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 HOXA4Q00056 320 aaPredicted RBP16.55■□□□□ 0.24
HDAC1-201ENST00000373548 FAM27E3Q08E93 113 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 LIAT1Q6ZQX7 453 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 LRTM2Q8N967 370 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 SECTM1Q8WVN6 248 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 ST8SIA2Q92186 375 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 MSI2Q96DH6 328 aaKnown RBP16.55■□□□□ 0.24
HDAC1-201ENST00000373548 MEMO1Q9Y316 297 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 PTPRQQ9UMZ3 2332 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 CHD3Q12873 2000 aaKnown RBP16.55■□□□□ 0.24
HDAC1-201ENST00000373548 HAND1O96004 215 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 IFNA21P01568 189 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 RLN2P04090 185 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 CEBPDP49716 269 aaPredicted RBP16.55■□□□□ 0.24
HDAC1-201ENST00000373548 UBA52P62987 128 aaKnown RBP16.55■□□□□ 0.24
HDAC1-201ENST00000373548 WDR82Q6UXN9 313 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 LRP11Q86VZ4 500 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 LDLRAD3Q86YD5 345 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 GAPTQ8N292 157 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 CABLES2Q9BTV7 478 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 UFSP2Q9NUQ7 469 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 PCDHB10Q9UN67 800 aa16.55■□□□□ 0.24
HDAC1-201ENST00000373548 TRAV39A0A0B4J263 110 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 A0A0G2JNJ9 132 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 MPPED1O15442 326 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 FIP1L1Q6UN15 594 aaKnown RBP16.54■□□□□ 0.24
HDAC1-201ENST00000373548 GFRALQ6UXV0 394 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 FAM185AQ8N0U4 392 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 C18orf12Q96KH6 178 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 TP53RKQ96S44 253 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 SLC5A7Q9GZV3 580 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 Q9UFV3 132 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 OR14J1Q9UGF5 321 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 ARID1AO14497 2285 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 POM121CA8CG34 1229 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 PHF1O43189 567 aaPredicted RBP16.54■□□□□ 0.24
HDAC1-201ENST00000373548 CRYAAP02489 173 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 ZNF818PQ6ZRF7 136 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 C22orf34Q6ZV56 151 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 MOB1BQ7L9L4 216 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 ZNF565Q8N9K5 539 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 KIRREL1Q96J84 757 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 KIF25Q9UIL4 384 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 TUBD1Q9UJT1 453 aa16.54■□□□□ 0.24
HDAC1-201ENST00000373548 PIEZO2Q9H5I5 2752 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 H7C1Q1 480 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 NMBP08949 121 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 LUMP51884 338 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-201ENST00000373548 S100A10P60903 97 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 RND3P61587 244 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 NKX6-1P78426 367 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-201ENST00000373548 PRR30Q53SZ7 412 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-201ENST00000373548 ESCO2Q56NI9 601 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 ACP7Q6ZNF0 438 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 LYZL2Q7Z4W2 148 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 OR1S1Q8NH92 325 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 LHFPL5Q8TAF8 219 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 DUSP13Q9UII6 198 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 BSNQ9UPA5 3926 aa16.53■□□□□ 0.24
HDAC1-201ENST00000373548 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 MSGN1A6NI15 193 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 GPR31O00270 319 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 ZNF250P15622 560 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 H1FOOQ8IZA3 346 aaPredicted RBP16.52■□□□□ 0.24
HDAC1-201ENST00000373548 LGI3Q8N145 548 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 OR10J5Q8NHC4 309 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 SNRNP40Q96DI7 357 aaKnown RBP16.52■□□□□ 0.24
HDAC1-201ENST00000373548 ARPC5LQ9BPX5 153 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 ZNF471Q9BX82 626 aaPredicted RBP16.52■□□□□ 0.24
HDAC1-201ENST00000373548 PIGMQ9H3S5 423 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 CCL28Q9NRJ3 127 aa16.52■□□□□ 0.24
HDAC1-201ENST00000373548 PSPNO60542 156 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 PET100P0DJ07 73 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 LMO1P25800 156 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 CCKARP32238 428 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 GLRXP35754 106 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 TBC1D26Q86UD7 250 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms