RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 Q8IYB0 196 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 LRTM2Q8N967 370 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 STOML3Q8TAV4 291 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 DCUN1D4Q92564 292 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 TRIB1Q96RU8 372 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 NAA60Q9H7X0 242 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 DOCK7Q96N67 2140 aa11.99□□□□□ -0.49
LDB3-204ENST00000372066 SPG11Q96JI7 2443 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 TRBV6-6A0A0A6YYG2 114 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 SPDEFO95238 335 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 COX5AP20674 150 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 IGHV1-2P23083 117 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 IL15RAQ13261 267 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
LDB3-204ENST00000372066 GABRA6Q16445 453 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 NAXEQ8NCW5 288 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 LRRC20Q8TCA0 184 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 NRGNQ92686 78 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 MICU1Q9BPX6 476 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 OBP2BQ9NPH6 170 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 ZFP57Q9NU63 452 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 MTCH1Q9NZJ7 389 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 MTORP42345 2549 aa11.98□□□□□ -0.49
LDB3-204ENST00000372066 A0A0G2JNJ9 132 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 F8VVB4 439 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 F8VWA3 439 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 I3L521 148 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 SMPD2O60906 423 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 ADAP1O75689 374 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 DIRAS3O95661 229 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 RAC2P15153 192 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 HOXC12P31275 282 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 FCGR2CP31995 323 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 PIGPP57054 158 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 SRPXP78539 464 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
LDB3-204ENST00000372066 MED13LQ71F56 2210 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 C17orf78Q8N4C9 275 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 RBPMSQ93062 196 aaKnown RBP11.97□□□□□ -0.49
LDB3-204ENST00000372066 AQP10Q96PS8 301 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 RSRP1Q9BUV0 290 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
LDB3-204ENST00000372066 Q9N2K0 584 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 RASL12Q9NYN1 266 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 ZNF581Q9P0T4 197 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 Q9UFV3 132 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 POLDIP2Q9Y2S7 368 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 FAM215AQ9Y5M1 114 aa11.97□□□□□ -0.49
LDB3-204ENST00000372066 LRP5LA4QPB2 252 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 RLN2P04090 185 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 CBR1P16152 277 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 PPP1CBP62140 327 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 ATXN7L3Q14CW9 347 aaPredicted RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 HAGHLQ6PII5 290 aaPredicted RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 DYRK2Q92630 601 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 MARS2Q96GW9 593 aaKnown RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 RNF126Q9BV68 326 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 DNTTIP1Q9H147 329 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 OR51I2Q9H344 312 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 CRIM1Q9NZV1 1036 aa11.96□□□□□ -0.49
LDB3-204ENST00000372066 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
LDB3-204ENST00000372066 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 TMEM210A6NLX4 147 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 IQCF6A8MYZ5 107 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 F5H0A9 414 aaPredicted RBP11.96□□□□□ -0.5
LDB3-204ENST00000372066 H7C1Q1 480 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 WDR1O75083 606 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 CRYZL1O95825 349 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 PPYP01298 95 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 TPT1P13693 172 aaKnown RBP11.96□□□□□ -0.5
LDB3-204ENST00000372066 CD99P14209 185 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 PRKACAP17612 351 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.5
LDB3-204ENST00000372066 LUMP51884 338 aaPredicted RBP11.96□□□□□ -0.5
LDB3-204ENST00000372066 RND3P61587 244 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 TMEM187Q14656 261 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 SMCO1Q147U7 214 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 C1orf185Q5T7R7 199 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 FAM58AQ8N1B3 248 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 RTN4IP1Q8WWV3 396 aaPredicted RBP11.96□□□□□ -0.5
LDB3-204ENST00000372066 TOMM40LQ969M1 308 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 OR10C1Q96KK4 312 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 SHARPINQ9H0F6 387 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 WDR13Q9H1Z4 485 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 LIME1Q9H400 295 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 SLC2A9Q9NRM0 540 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 SDHAF2Q9NX18 166 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 TREM2Q9NZC2 230 aa11.96□□□□□ -0.5
LDB3-204ENST00000372066 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
LDB3-204ENST00000372066 TRDCB7Z8K6 153 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 TAAR5O14804 337 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 SYNGR1O43759 233 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms