RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MEIKINA0A087WXM9 373 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A0A6YYH2 397 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 A6NJ64 397 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 RAB27BO00194 218 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 TOX4O94842 621 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 MMP9P14780 707 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 TMEM50BP56557 158 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF273Q14593 569 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 MZT2AQ6P582 158 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 TRAPPC6BQ86SZ2 158 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 OR5H6Q8NGV6 325 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 UPRTQ96BW1 309 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 FAAP24Q9BTP7 215 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 UNKLQ9H9P5 680 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 ING3Q9NXR8 418 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 KIF25Q9UIL4 384 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 CSPG4Q6UVK1 2322 aa12.78□□□□□ -0.36
PRPF38B-202ENST00000370022 UBE2QL1A1L167 161 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 POM121CA8CG34 1229 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 MT-ND4P03905 459 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF728P0DKX0 622 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 UBE2NLQ5JXB2 153 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 TCF23Q7RTU1 214 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 DYNC2LI1Q8TCX1 351 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 SULT4A1Q9BR01 284 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 ABCG5Q9H222 651 aa12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 RIMS4Q9H426 269 aaPredicted RBP12.77□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 C17orf98A8MV24 154 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 GZMHP20718 246 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 MOGAT2Q3SYC2 334 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 PLAC9Q5JTB6 97 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 Q8N7P7 452 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 SAMD12Q8N8I0 201 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 SLC25A38Q96DW6 304 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 S100A16Q96FQ6 103 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 PCGF1Q9BSM1 259 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 PECRQ9BY49 303 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 DIABLOQ9NR28 239 aa12.77□□□□□ -0.37
PRPF38B-202ENST00000370022 AVPP01185 164 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 HIST1H1DP16402 221 aaKnown RBP12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 CCL3L1P16619 93 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 PRTN3P24158 256 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 DLX6P56179 175 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 C1orf229Q6ZS94 237 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 VMO1Q7Z5L0 202 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 DGCR14Q96DF8 476 aaKnown RBP12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 RAB9BQ9NP90 201 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 COMMD3Q9UBI1 195 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 TRAPPC2LQ9UL33 140 aa12.76□□□□□ -0.37
PRPF38B-202ENST00000370022 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 MFNGO00587 321 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 APOA1P02647 267 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 GLP1RP43220 463 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 BPIFB3P59826 476 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 ERVFRD-1P60508 538 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 MRPS15P82914 257 aaKnown RBP12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 OR13A1Q8NGR1 328 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 DYRK2Q92630 601 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 PPP1R14BQ96C90 147 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 LINC00574Q9H8X3 128 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 C12orf4Q9NQ89 552 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 MBNL3Q9NUK0 354 aaKnown RBP12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 ZFHX3Q15911 3703 aa12.75□□□□□ -0.37
PRPF38B-202ENST00000370022 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 KBTBD11-OT1A0A1B0GTJ5 212 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 DPPA5A6NC42 116 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 ORC5O43913 435 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 CLPXO76031 633 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 NAPSAO96009 420 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 FSHBP01225 129 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 GSTP1P09211 210 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 CGB3P0DN86 165 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 CGB7P0DN87 165 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 CHRFAM7AQ494W8 412 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 OR52W1Q6IF63 320 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 OR10A7Q8NGE5 316 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms