RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ARF6P62330 175 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 C4orf45Q96LM5 186 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 KIR3DL2P43630 455 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TNFAIP6P98066 277 aaPredicted RBP11.05□□□□□ -0.64
HCFC1-202ENST00000369984 GSTZ1O43708 216 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 COL8A1P27658 744 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PGFP49763 221 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 KLF3P57682 345 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 WIPI1Q5MNZ9 446 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 FREM3P0C091 2139 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 METAP1P53582 386 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 WNT3P56703 355 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 RAE1P78406 368 aaKnown RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 GAB4Q2WGN9 574 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 CYB5R2Q6BCY4 276 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PERPQ96FX8 193 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 J3KRW8 73 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF253O75346 499 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 COX7A1P24310 79 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 SCAND1P57086 179 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 RPS4XP62701 263 aaKnown RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 SLC6A13Q9NSD5 602 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 MYF5P13349 255 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF117Q03924 483 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PSG5Q15238 335 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TNXAQ16473 311 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 BSXQ3C1V8 233 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TSPO2Q5TGU0 170 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF502Q8TBZ5 544 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 LINC00052Q96N35 136 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PGA4P0DJD7 388 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PGA5P0DJD9 388 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TIMP4Q99727 224 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF275Q9NSD4 429 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TCRBV16S1A1N1A0A5B0 115 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 IL24Q13007 206 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 ERASQ7Z444 233 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 CALHM1Q8IU99 346 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 PIK3IP1Q96FE7 263 aa11.04□□□□□ -0.64
HCFC1-202ENST00000369984 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 CEACAM5P06731 702 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 POLR2GP62487 172 aaKnown RBP eCLIP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ABHD3Q8WU67 409 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 HSF4Q9ULV5 492 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PTPRFP10586 1907 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 A0A1B0GTL3 188 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 OR4C45A6NMZ5 311 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 YBX1P67809 324 aaKnown RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 RHOVQ96L33 236 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 LRRC61Q9BV99 259 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ANGPTL4Q9BY76 406 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 MFSD2BA6NFX1 497 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 HYAL3O43820 417 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PDCD6O75340 191 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 CEACAM3P40198 252 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 FAM209BQ5JX69 171 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 SRFP11831 508 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 SELENOPP49908 381 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PLAURQ03405 335 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 TSPAN32Q96QS1 320 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 TRBV5-4A0A0C4DH59 114 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 A0A1W2PPC4 97 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 FAM157AC9JC47 383 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 LMO7DNF2Z398 122 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF32P17041 273 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 SLC35E3Q7Z769 313 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ANKRD20A5PA0PJZ0 165 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 KLK10O43240 276 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 P2RY1P47900 373 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 TEX30Q5JUR7 227 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 OR4P4Q8NGL7 312 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 HIST1H1EP10412 219 aaKnown RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 TMEM108Q6UXF1 575 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 ZDBF2Q9HCK1 2354 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms