RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 BRICD5Q6PL45 260 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 ZNF782Q6ZMW2 699 aaPredicted RBP12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 C9orf139Q6ZV77 190 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 SIGLECL1Q8N7X8 197 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 OR6M1Q8NGM8 313 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 BORCS5Q969J3 196 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 LINC00312Q9Y6C7 94 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 V9GY05 133 aa12.34□□□□□ -0.43
SMPDL3A-201ENST00000368440 hADV38S2A0JD32 116 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM25AB3EWG3 89 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM25CB3EWG5 89 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM25GB3EWG6 89 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 SLC17A2O00624 439 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 TCF21O43680 179 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 UNC119Q13432 240 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 MPV17LQ2QL34 196 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 KRBOX4Q5JUW0 171 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 LINC00596Q86U02 117 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 Q96M66 194 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZNF714Q96N38 554 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 DPCDQ9BVM2 203 aaPredicted RBP12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A1W2PPH5 198 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 ODAMA1E959 279 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 MPIG6BO95866 241 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 QRFPP83859 136 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 DEFB112Q30KQ8 113 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 KRTAP21-3Q3LHN1 58 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 ATAD3CQ5T2N8 411 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 TRAPPC6BQ86SZ2 158 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 CCDC190Q86UF4 302 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 SAMD12Q8N8I0 201 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 OR5H6Q8NGV6 325 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZNF418Q8TF45 676 aaPredicted RBP12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 MRPS24Q96EL2 167 aaKnown RBP12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 ESM1Q9NQ30 184 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 KIF25Q9UIL4 384 aa12.32□□□□□ -0.44
SMPDL3A-201ENST00000368440 UBBP0CG47 229 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 RSBN1Q5VWQ0 802 aaPredicted RBP12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 CROCCP3Q8IVE0 287 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 CST11Q9H112 138 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 RCC2Q9P258 522 aaKnown RBP12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A0U1RQK1 487 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 IFITM5A6NNB3 132 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 TMEM14DPA8MWL7 114 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 MMP23AO75900 390 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 BPNT1O95861 308 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 HILS1P60008 231 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 RAB11BQ15907 218 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 NCR3LG1Q68D85 454 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 CNIH2Q6PI25 160 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 ACOT12Q8WYK0 555 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
SMPDL3A-201ENST00000368440 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 FUOMA2VDF0 154 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 EIF4EP06730 217 aaKnown RBP12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 ELK1P19419 428 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 COX7A1P24310 79 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 GDNFP39905 211 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 UBE2E1P51965 193 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 BAIAP2L2Q6UXY1 529 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 RTN4RL2Q86UN3 420 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZDHHC22Q8N966 263 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 OR13A1Q8NGR1 328 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 CORO2AQ92828 525 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 LIN7BQ9HAP6 207 aa12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 UBE2J1Q9Y385 318 aaPredicted RBP12.3□□□□□ -0.44
SMPDL3A-201ENST00000368440 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FABP12A6NFH5 140 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 AIPO00170 330 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 NPFFO15130 113 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 ARSBP15848 533 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 BPIFB3P59826 476 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZNF45Q02386 682 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 PLA2G7Q13093 441 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 KRTAP24-1Q3LI83 254 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 RAB12Q6IQ22 244 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms