RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 KIRREL1Q96J84 757 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 MRPS28Q9Y2Q9 187 aaKnown RBP15.26■□□□□ 0.03
CKS1B-203ENST00000368439 TPRKBQ9Y3C4 175 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 NPIPB11E5RHQ5 1161 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 GTF2F2P13984 249 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 CRHBPP24387 322 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 MAPK3P27361 379 aaPredicted RBP15.25■□□□□ 0.03
CKS1B-203ENST00000368439 GLP1RP43220 463 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 GPR50Q13585 617 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 MED22Q15528 200 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 ACSM3Q53FZ2 586 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 FAM27D1Q5T7N8 215 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 ZNF565Q8N9K5 539 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 VCX3BQ9H321 246 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 RANBP3Q9H6Z4 567 aaPredicted RBP15.25■□□□□ 0.03
CKS1B-203ENST00000368439 RAB18Q9NP72 206 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 PCDHB16Q9NRJ7 776 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 CALYQ9NYX4 217 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 RCC2Q9P258 522 aaKnown RBP15.25■□□□□ 0.03
CKS1B-203ENST00000368439 SIGLEC9Q9Y336 463 aa15.25■□□□□ 0.03
CKS1B-203ENST00000368439 TRAV39A0A0B4J263 110 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 FAM90A22PA8MWA6 464 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 LY6LH3BQJ8 138 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 GABRA5P31644 462 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 EFNB2P52799 333 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 GPR176Q14439 515 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 HLA-DRB5Q30154 266 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 BRICD5Q6PL45 260 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 LRRTM1Q86UE6 522 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 NKAIN3Q8N8D7 197 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 NDNFQ8TB73 568 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 ZNF596Q8TC21 504 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 TMED9Q9BVK6 235 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 DPM3Q9P2X0 92 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 VWFP04275 2813 aa15.24■□□□□ 0.03
CKS1B-203ENST00000368439 WNK1Q9H4A3 2382 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 RGS10O43665 173 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 IL1AP01583 271 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 CD37P11049 281 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 HSPA13P48723 471 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 TPBGQ13641 420 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 AWAT2Q6E213 333 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 TMEM219Q86XT9 240 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 TMEM104Q8NE00 496 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 MRGPRDQ8TDS7 321 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 MRPS24Q96EL2 167 aaKnown RBP15.23■□□□□ 0.03
CKS1B-203ENST00000368439 UQCC2Q9BRT2 126 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 ABCB10Q9NRK6 738 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 IDI2-AS1Q9NZ38 188 aa15.23■□□□□ 0.03
CKS1B-203ENST00000368439 BUB1B-PAK6H3BSN5 160 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 ATP6V1G2O95670 118 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 NFYBP25208 207 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 SSTR5P35346 364 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 LIPKQ5VXJ0 399 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 PRSS48Q7RTY5 328 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 Q8N2B8 174 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 OR4C13Q8NGP0 309 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 CYYR1Q96J86 154 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 NPFFR1Q9GZQ6 430 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 BANF2Q9H503 90 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 ZNF702PQ9H963 129 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 ISYNA1Q9NPH2 558 aa15.22■□□□□ 0.03
CKS1B-203ENST00000368439 TMEM30CPA0ZSE6 113 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 LEUTXA8MZ59 168 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 C15orf65H3BRN8 121 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 UCHL1P09936 223 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 MGMTP16455 207 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 FBLN7Q53RD9 439 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 C1orf100Q5SVJ3 147 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 SIGIRRQ6IA17 410 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 ZNF497Q6ZNH5 498 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 TMEM91Q6ZNR0 172 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 OR10A7Q8NGE5 316 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 OR9G1Q8NH87 305 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 RFESDQ8TAC1 157 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 PHYHIPQ92561 330 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 UFD1Q92890 307 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 Q96M66 194 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 PITPNC1Q9UKF7 332 aa15.21■□□□□ 0.03
CKS1B-203ENST00000368439 FAM90A10PA6NDY2 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A18PA6NE21 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A16PA6NEW6 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A20PA6NIJ5 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A7PA6NKC0 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A12PA8MX19 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A5PA8MXJ8 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A23PA8MXZ1 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 J3QR06 171 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 F2RL2O00254 374 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 TOR1AO14656 332 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 MT-ND4P03905 459 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A15PP0C7V4 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A13PP0C7W8 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A14PP0C7W9 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 FAM90A24PP0C7X0 464 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 SRMP19623 302 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 PRRX1P54821 245 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 TPTE2P1Q5T6R2 138 aa15.2■□□□□ 0.02
CKS1B-203ENST00000368439 TREML4Q6UXN2 200 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms