RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 IGHV3-7P01780 117 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 RAB3AP20336 220 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 THBS3P49746 956 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 RPL23AP62750 156 aaKnown RBP12.67□□□□□ -0.38
CKS1B-202ENST00000368436 RAB40BQ12829 278 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 ZNF329Q86UD4 541 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 CBR4Q8N4T8 237 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 OR51A2Q8NGJ7 313 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 RHOXF1Q8NHV9 184 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 CHPT1Q8WUD6 406 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 TNFAIP8L1Q8WVP5 186 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 TSEN15Q8WW01 171 aaKnown RBP12.67□□□□□ -0.38
CKS1B-202ENST00000368436 Q96MT0 163 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 GPR61Q9BZJ8 451 aa12.67□□□□□ -0.38
CKS1B-202ENST00000368436 MRPS18AQ9NVS2 196 aaKnown RBP12.67□□□□□ -0.38
CKS1B-202ENST00000368436 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 MAGEB3O15480 346 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 MPZL2O60487 215 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 IGHG2P01859 326 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 TMEM11P17152 192 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 SLC6A1P30531 599 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-202ENST00000368436 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-202ENST00000368436 EBI3Q14213 229 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 RSU1Q15404 277 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 DEFB121Q5J5C9 76 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 LPCAT4Q643R3 524 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 OR51D1Q8NGF3 324 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 OR52I1Q8NGK6 324 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 MRGPRDQ8TDS7 321 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 RGP1Q92546 391 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-202ENST00000368436 NOL4LQ96MY1 436 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-202ENST00000368436 GPER1Q99527 375 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 JAM3Q9BX67 310 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 AMBNQ9NP70 447 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 ZFP57Q9NU63 452 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 DNAH9Q9NYC9 4486 aa12.66□□□□□ -0.38
CKS1B-202ENST00000368436 SSTR5P35346 364 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 GTF2A1P52655 376 aaPredicted RBP12.65□□□□□ -0.38
CKS1B-202ENST00000368436 HES1Q14469 280 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 LTC4SQ16873 150 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 NHLRC3Q5JS37 347 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 ZFP1Q6P2D0 407 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 OR2W3Q7Z3T1 314 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 SATL1Q86VE3 508 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 OR10K1Q8NGX5 313 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 DPCDQ9BVM2 203 aaPredicted RBP12.65□□□□□ -0.38
CKS1B-202ENST00000368436 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 TAS2R4Q9NYW5 299 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 IL36GQ9NZH8 169 aa12.65□□□□□ -0.38
CKS1B-202ENST00000368436 TRAV39A0A0B4J263 110 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 SERPINE3A8MV23 424 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 HTR3BO95264 441 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 LIMS3P0CW19 117 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 LIMS4P0CW20 117 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 GZMHP20718 246 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 MYCNOSP40205 109 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 SOX2P48431 317 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 GNG10P50151 68 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
CKS1B-202ENST00000368436 HNF4GQ14541 408 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 C18orf65Q6ZTR6 163 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 SUMF2Q8NBJ7 301 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 P2RX4Q99571 388 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 MCRIP2Q9BUT9 160 aaKnown RBP12.64□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
CKS1B-202ENST00000368436 RPL36Q9Y3U8 105 aaKnown RBP12.64□□□□□ -0.39
CKS1B-202ENST00000368436 C15orf65H3BRN8 121 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 HSD17B6O14756 317 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 CDRT1O95170 752 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
CKS1B-202ENST00000368436 SLC35B1P78383 322 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 KLHL22Q53GT1 634 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 SLC35E3Q7Z769 313 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 OR52M1Q8NGK5 317 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 APH1BQ8WW43 257 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 DPF1Q92782 380 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 SLC29A1Q99808 456 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 FGF20Q9NP95 211 aaPredicted RBP12.63□□□□□ -0.39
CKS1B-202ENST00000368436 FAM118AQ9NWS6 357 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
CKS1B-202ENST00000368436 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 LOC100130705A0A1B0GUX0 176 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 A0A1W2PPE3 182 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 CD2P06729 351 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
CKS1B-202ENST00000368436 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms