RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RASSF6Q6ZTQ3 369 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 IZUMO1Q8IYV9 350 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR8H3Q8N146 312 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 BBS1Q8NFJ9 593 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR4D6Q8NGJ1 314 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR13A1Q8NGR1 328 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OTULINQ96BN8 352 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 TMED9Q9BVK6 235 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR51V1Q9H2C8 321 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR51J1Q9H342 316 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 PCDHB16Q9NRJ7 776 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 CMC2Q9NRP2 79 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 NUFIP1Q9UHK0 495 aaKnown RBP6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 COPS3Q9UNS2 423 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 DNAH17Q9UFH2 4485 aa6.46□□□□□ -1.38
HMGB1P39-201ENST00000366304 IGKV1-12A0A0C4DH73 117 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 KBTBD11-OT1A0A1B0GTJ5 212 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 RIIAD1A6NNX1 92 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 LINC01619G3V211 115 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 IGKV1D-12P01611 117 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 PRKACAP17612 351 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 RAB7AP51149 207 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 SMIM11AP58511 58 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF816Q0VGE8 651 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 SPCS2Q15005 226 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 LTC4SQ16873 150 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 CGB2Q6NT52 195 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 PLEKHG7Q6ZR37 379 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 MOB3BQ86TA1 216 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 FAM58AQ8N1B3 248 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 EME1Q96AY2 570 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 RITA1Q96K30 269 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 KCTD14Q9BQ13 255 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 OSBPL10Q9BXB5 764 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 ACTR3BQ9P1U1 418 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF580Q9UK33 172 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
HMGB1P39-201ENST00000366304 PKD1P98161 4303 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 TRAV39A0A0B4J263 110 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 TRBV2A0A0J9YWF9 115 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 SMIM31A0A1B0GVY4 71 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF729A6NN14 1252 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 HSD17B6O14756 317 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 ATP6V0E1O15342 81 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 HNRNPCP07910 306 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 SLC2A2P11168 524 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF3P17036 446 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 SLC2A5P22732 501 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 SOX6P35712 828 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 IFNGR2P38484 337 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 VHLP40337 213 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 KIR3DL2P43630 455 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 RASSF2P50749 326 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 ATXN7L3Q14CW9 347 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 KRBOX4Q5JUW0 171 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 GLYATQ6IB77 296 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 RPL13AP3Q6NVV1 102 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 Q6P435 159 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 TMEM65Q6PI78 240 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 AQP11Q8NBQ7 271 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 MINDY2Q8NBR6 621 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR2T33Q8NG76 320 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR2T10Q8NGZ9 312 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 RFESDQ8TAC1 157 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 PYURFQ96I23 114 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 OR4C12Q96R67 309 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 RASL11BQ9BPW5 248 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 TUBA4BQ9H853 241 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 LINC00574Q9H8X3 128 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 PLEKHA3Q9HB20 300 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 HMG20AQ9NP66 347 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 MRGBPQ9NV56 204 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 CALYQ9NYX4 217 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 ZNF107Q9UII5 783 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 RABL2BQ9UNT1 228 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 MYRFQ9Y2G1 1151 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 FBXO7Q9Y3I1 522 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 AMMECR1Q9Y4X0 333 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 CEPT1Q9Y6K0 416 aa6.44□□□□□ -1.38
HMGB1P39-201ENST00000366304 IGKV1-9A0A0C4DH69 117 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 NPIPB11E5RHQ5 1161 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 SLC33A1O00400 549 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 MPZL2O60487 215 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 MOSP00540 346 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 IFNGP01579 166 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 IGHV3-11P01762 117 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 LGALS1P09382 135 aaKnown RBP6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 HTR1FP30939 366 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 HMGA2P52926 109 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 PITPNAQ00169 270 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 NDPQ00604 133 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 ROM1Q03395 351 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 ARPINQ7Z6K5 226 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 ENTHD1Q8IYW4 607 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 ELMOD2Q8IZ81 293 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 HAVCR2Q8TDQ0 301 aa6.43□□□□□ -1.38
HMGB1P39-201ENST00000366304 GIMAP1Q8WWP7 306 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms