RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SLC19A3Q9BZV2 496 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 NXF2Q9GZY0 626 aaKnown RBP0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ACOT13Q9NPJ3 140 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 ARAP3Q8WWN8 1544 aa0.99□□□□□ -2.25
RNU4-28P-201ENST00000364739 WDR19Q8NEZ3 1342 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGKV1D-43A0A0B4J1Z2 117 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 A8MWP6 167 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 F8VP50 259 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 ZNF593O00488 134 aaPredicted RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 SPOPO43791 374 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 STAG3L3P0CL85 134 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 ZNF3P17036 446 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 HTR4Q13639 388 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 Q6ZRN7 208 aaPredicted RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 C10orf107Q8IVU9 208 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 FAM58AQ8N1B3 248 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 OR51L1Q8NGJ5 315 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 PEX13Q92968 403 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 ZNF396Q96N95 335 aaPredicted RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 VAT1Q99536 393 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 MRPL32Q9BYC8 188 aaKnown RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 ALX4Q9H161 411 aaPredicted RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 TDRD3Q9H7E2 651 aaKnown RBP0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 DNAJC27Q9NZQ0 273 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 PSORS1C2Q9UIG4 136 aa0.98□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGHV2-26A0A0B4J1V2 119 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGKV1-12A0A0C4DH73 117 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 GMDSO60547 372 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 IGKV1D-12P01611 117 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 CRYGDP07320 174 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 OR2B6P58173 313 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 C2orf80Q0P641 193 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 OR8G1Q15617 311 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 SSX7Q7RTT5 188 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 ARHGAP18Q8N392 663 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 GATD1Q8NB37 220 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 OR51Q1Q8NH59 317 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 IFNKQ9P0W0 207 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 POMPQ9Y244 141 aa0.97□□□□□ -2.25
RNU4-28P-201ENST00000364739 MUC21A0A0G2JKD1 596 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 MUC21A0A140T8X8 626 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 NCF1BA6NI72 391 aaPredicted RBP0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 NCF1CA8MVU1 366 aaPredicted RBP0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 PLPP3O14495 311 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 TCF21O43680 179 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 SRMP19623 302 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 PEX19P40855 299 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 WDR43Q15061 677 aaKnown RBP eCLIP0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 CLEC20AQ6ZU45 233 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 SLC25A45Q8N413 288 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 ZIC4Q8N9L1 334 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 DRAXINQ8NBI3 349 aaPredicted RBP0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 SPPL2BQ8TCT7 592 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 AGR3Q8TD06 166 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 MYCBPQ99417 103 aaPredicted RBP0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 RGCCQ9H4X1 137 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 HEY1Q9Y5J3 304 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 V9GYY9 64 aa0.96□□□□□ -2.26
RNU4-28P-201ENST00000364739 CD8AP01732 235 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 TPRXLQ17RH7 258 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 SDIM1Q6ZPB5 146 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 FAM19A3Q7Z5A8 133 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 SELENOHQ8IZQ5 122 aaKnown RBP0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 ERMNQ8TAM6 284 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 CD200R1Q8TD46 325 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 GPR22Q99680 433 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 POTEKPQ9BYX7 375 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 FBXO44Q9H4M3 255 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 DIABLOQ9NR28 239 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 SDHAF2Q9NX18 166 aa0.95□□□□□ -2.26
RNU4-28P-201ENST00000364739 TTC41PQ6P2S7 1318 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 SOD1P00441 154 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 CA2P00918 260 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 ARR3P36575 388 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 EMP2P54851 167 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 GUSBP1Q15486 140 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 LGALS9CQ6DKI2 356 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 FAM19A1Q7Z5A9 133 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 CASTOR1Q8WTX7 329 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 APOL4Q9BPW4 351 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 MYO5BQ9ULV0 1848 aa0.94□□□□□ -2.26
RNU4-28P-201ENST00000364739 TOR1AO14656 332 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 SPAM1P38567 509 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 GCLMP48507 274 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 RHOAP61586 193 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 DEFA6Q01524 100 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 STX4Q12846 297 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 ZFAND2AQ8N6M9 145 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 NELFBQ8WX92 580 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 BCL2L14Q9BZR8 327 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 TBL2Q9Y4P3 447 aaKnown RBP0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 SLX4Q8IY92 1834 aa0.93□□□□□ -2.26
RNU4-28P-201ENST00000364739 AQRO60306 1485 aaKnown RBP eCLIP0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 NUMA1Q14980 2115 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 RTEL1-TNFRSF6BF6WH68 1400 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 PDCD6O75340 191 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 GPX1P07203 203 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 SLC2A1P11166 492 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 PRKACAP17612 351 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 GABRA3P34903 492 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms