RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 NCOA6Q14686 2063 aaPredicted RBP-0.68□□□□□ -2.52
RNU4-40P-201ENST00000364351 IGHV3OR15-7A0A075B7D8 119 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 F8W036 122 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 UBCP0CG48 685 aaKnown RBP-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 CLDN6P56747 220 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 C2orf80Q0P641 193 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 SBSPONQ8IVN8 264 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 PANX1Q96RD7 426 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 ADAT1Q9BUB4 502 aaKnown RBP-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 C16orf95Q9H693 158 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 C8orf4Q9NR00 106 aa-0.69□□□□□ -2.52
RNU4-40P-201ENST00000364351 C11orf86A6NJI1 115 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 CD9P21926 228 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 ATP6V0D1P61421 351 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 GOLGA7BQ2TAP0 167 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 TMEM220Q6QAJ8 160 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 FAM19A2Q8N3H0 131 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 C8orf31Q8N9H6 132 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 C15orf53Q8NAA6 179 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 SPPL2BQ8TCT7 592 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 FMC1Q96HJ9 113 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 OPALINQ96PE5 141 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 ZC4H2Q9NQZ6 224 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 C20orf96Q9NUD7 363 aaPredicted RBP-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 WASHC3Q9Y3C0 194 aa-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 YLPM1P49750 1951 aaKnown RBP-0.7□□□□□ -2.52
RNU4-40P-201ENST00000364351 TMSB15BA0A087X1C1 80 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 CRPP02741 224 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 PRKACAP17612 351 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 M6PRP20645 277 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 AKR1C3P42330 323 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 HCCSP53701 268 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 SSX9Q7RTT3 188 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 COA1Q9GZY4 146 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 POMKQ9H5K3 350 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 DDIT4Q9NX09 232 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 MYH11P35749 1972 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 PCDH15Q96QU1 1955 aa-0.71□□□□□ -2.52
RNU4-40P-201ENST00000364351 GOLGA8OA6NCC3 632 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 GOLGA8NF8WBI6 632 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 NUMA1Q14980 2115 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 CARD17Q5XLA6 110 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 FP248Q71RG6 208 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 SSX7Q7RTT5 188 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 FAM122BQ7Z309 247 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 SETD3Q86TU7 594 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 PQLC3Q8N755 202 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 TRIML2Q8N7C3 387 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 ASB17Q8WXJ9 295 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 CCL17Q92583 94 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 WDR55Q9H6Y2 383 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 C12orf4Q9NQ89 552 aa-0.72□□□□□ -2.52
RNU4-40P-201ENST00000364351 KIAA2026Q5HYC2 2103 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 IGHV3-73A0A0B4J1V6 119 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 IGKV1-12A0A0C4DH73 117 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 RFPL4AA6NLU0 287 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 RFPL4AL1F8VTS6 287 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 M0QXV9 152 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 GNRH2O43555 120 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 DENRO43583 198 aaKnown RBP-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 ALOX12BO75342 701 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 ZNF737O75373 536 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 NPPAP01160 153 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 IGKV1D-12P01611 117 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 IDH3GP51553 393 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 MLF1P58340 268 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 SYT6Q5T7P8 510 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 ARMC12Q5T9G4 340 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 BBOF1Q8ND07 529 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 SLC38A1Q9H2H9 487 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 GEMIN7Q9H840 131 aaKnown RBP-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 COX16Q9P0S2 106 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 MTCH2Q9Y6C9 303 aa-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 NSD1Q96L73 2696 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-40P-201ENST00000364351 NAV3Q8IVL0 2385 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 MUC12Q9UKN1 5478 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 C2orf74A8MZ97 194 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 H3BPC8 53 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 ZNF701M0R085 212 aaPredicted RBP-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 SCN2BO60939 215 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 CIB2O75838 187 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 OR5AL1P0C617 328 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 RAD51Q06609 339 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 DNAJC3Q13217 504 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 ACTBL2Q562R1 376 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 BEX5Q5H9J7 111 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 TPRG1LQ5T0D9 272 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 FAM27D1Q5T7N8 215 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 CYP4Z1Q86W10 505 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 NELFCDQ8IXH7 590 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 GCNT4Q9P109 453 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 CFL2Q9Y281 166 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 NRCAMQ92823 1304 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 ARAP3Q8WWN8 1544 aa-0.74□□□□□ -2.53
RNU4-40P-201ENST00000364351 LOC100653049A0A140TA62 436 aa-0.75□□□□□ -2.53
RNU4-40P-201ENST00000364351 KRT34O76011 436 aa-0.75□□□□□ -2.53
RNU4-40P-201ENST00000364351 LY6HO94772 140 aa-0.75□□□□□ -2.53
RNU4-40P-201ENST00000364351 RAB25P57735 213 aa-0.75□□□□□ -2.53
RNU4-40P-201ENST00000364351 TMEM155Q4W5P6 130 aa-0.75□□□□□ -2.53
RNU4-40P-201ENST00000364351 LUZP2Q86TE4 346 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms