RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SSX7Q7RTT5 188 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 DRAXINQ8NBI3 349 aaPredicted RBP0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 ERMNQ8TAM6 284 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 SPPL2BQ8TCT7 592 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 CD200R1Q8TD46 325 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 DOK4Q8TEW6 326 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 TMBIM1Q969X1 311 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 GPR22Q99680 433 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 ALX4Q9H161 411 aaPredicted RBP0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 ACOT13Q9NPJ3 140 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 DIABLOQ9NR28 239 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 TMEM131Q92545 1883 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 MIA3Q5JRA6 1907 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 OTOFQ9HC10 1997 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 RTEL1-TNFRSF6BF6WH68 1400 aa0.79□□□□□ -2.28
RNU6-553P-201ENST00000364047 IGLV3-9A0A075B6K5 115 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 VPS37CA5D8V6 355 aaPredicted RBP0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 TVP23AA6NH52 213 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 SPOPO43791 374 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 CRYGDP07320 174 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 SPAM1P38567 509 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 BCAP31P51572 246 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 RWDD2BP57060 319 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 ZNF117Q03924 483 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 ZIC4Q8N9L1 334 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 IFNKQ9P0W0 207 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 POMPQ9Y244 141 aa0.78□□□□□ -2.28
RNU6-553P-201ENST00000364047 COL18A1P39060 1754 aa0.78□□□□□ -2.29
RNU6-553P-201ENST00000364047 LCTP09848 1927 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 CA2P00918 260 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 SLC2A1P11166 492 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 GCLMP48507 274 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 LGALS9CQ6DKI2 356 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 SDIM1Q6ZPB5 146 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 ARHGAP18Q8N392 663 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 C10orf126Q8N4M7 172 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 NELFBQ8WX92 580 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 CLDN23Q96B33 292 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 BIRC8Q96P09 236 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 APOL4Q9BPW4 351 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 SPZ1Q9BXG8 430 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 USP42Q9H9J4 1324 aaKnown RBP0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 HMCN1Q96RW7 5635 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 MPDZO75970 2070 aa0.77□□□□□ -2.29
RNU6-553P-201ENST00000364047 TRPM3Q9HCF6 1732 aaPredicted RBP0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 AQRO60306 1485 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 A0A1B0GTQ1 180 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 K7EN84 100 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 CD8AP01732 235 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 OR4A8P0C604 315 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 CD36P16671 472 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 TPRXLQ17RH7 258 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 CCDC121Q6ZUS5 278 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 TMCO2Q7Z6W1 182 aaPredicted RBP0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 ZFAND2AQ8N6M9 145 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 GATD1Q8NB37 220 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 Q9BRP9 147 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 RGCCQ9H4X1 137 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 TXNL4BQ9NX01 149 aaKnown RBP0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 WASHC3Q9Y3C0 194 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 V9GYY9 64 aa0.76□□□□□ -2.29
RNU6-553P-201ENST00000364047 NEURL4Q96JN8 1562 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 STAG3L3P0CL85 134 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 NQO1P15559 274 aaKnown RBP0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 ZNF3P17036 446 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 PRKACAP17612 351 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 ALOX5APP20292 161 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 GTF2H1P32780 548 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 LPAR6P43657 344 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 TTPAP49638 278 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 ZNRF2Q8NHG8 242 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 C10orf105Q8TEF2 133 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 GTF2H4Q92759 462 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 FAM131CQ96AQ9 280 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 ZNF707Q96C28 371 aaPredicted RBP0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 RETNLBQ9BQ08 111 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 UTP23Q9BRU9 249 aaKnown RBP0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 CHID1Q9BWS9 393 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 VCX3AQ9NNX9 186 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 SDHAF2Q9NX18 166 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 DOK5Q9P104 306 aa0.75□□□□□ -2.29
RNU6-553P-201ENST00000364047 IGKV1-12A0A0C4DH73 117 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 ARRDC5A6NEK1 342 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 NCF1BA6NI72 391 aaPredicted RBP0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 NCF1CA8MVU1 366 aaPredicted RBP0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 DENRO43583 198 aaKnown RBP0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 PDCD6O75340 191 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 SOD1P00441 154 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 IGKV1D-12P01611 117 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 IGKV5-2P06315 115 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 PEBP1P30086 187 aaKnown RBP0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 PYCR1P32322 319 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 MAGEA12P43365 314 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 CBX5P45973 191 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 STX4Q12846 297 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 RESP18Q5W5W9 173 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 CLEC20AQ6ZU45 233 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 OLIG3Q7RTU3 272 aa0.74□□□□□ -2.29
RNU6-553P-201ENST00000364047 OR4X2Q8NGF9 303 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms