RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
SMC5-201ENST00000361138 CISD1Q9NZ45 108 aaKnown RBP12.22□□□□□ -0.45
SMC5-201ENST00000361138 TDRD15B5MCY1 1934 aaKnown RBP12.22□□□□□ -0.45
SMC5-201ENST00000361138 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 FA2HQ7L5A8 372 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 DEFB123Q8N688 67 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 SCCPDHQ8NBX0 429 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 LRFN3Q9BTN0 628 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
SMC5-201ENST00000361138 CRYAAP02489 173 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 COX19Q49B96 90 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 FAM173AQ9BQD7 235 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 SLC7A10Q9NS82 523 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 IGLV1-36A0A0B4J1U3 117 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 A0A1B0GTQ1 180 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 FCGR3BO75015 233 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 PSG2P11465 335 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 REG4Q9BYZ8 158 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 M0R1X1 148 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 COL9A1P20849 921 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 PET117Q6UWS5 81 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.45
SMC5-201ENST00000361138 CSN1S1P47710 185 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 RPS11P62280 158 aaKnown RBP eCLIP12.21□□□□□ -0.46
SMC5-201ENST00000361138 FDX2Q6P4F2 183 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 TGIF2LXQ8IUE1 241 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 TMEM252Q8N6L7 170 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 GNRHR2Q96P88 292 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 IP6K3Q96PC2 410 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 CA6P23280 308 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 ZNRF4Q8WWF5 429 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 PCGF1Q9BSM1 259 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 SARGQ9BW04 601 aa12.21□□□□□ -0.46
SMC5-201ENST00000361138 DIRC3C9JPN6 131 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 IL11P20809 199 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 IER3P46695 156 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 SRSF3P84103 164 aaKnown RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 PCOLCE2Q9UKZ9 415 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 SIAH2O43255 324 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 PATE4P0C8F1 98 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 PNLIPP16233 465 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 P2RX4Q99571 388 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 G6PC2Q9NQR9 355 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 DECR2Q9NUI1 292 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 A0A1W2PP11 408 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 DEFB108AA8MXU0 73 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 FCER1GP30273 86 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 FHITP49789 147 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 GNB1P62873 340 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 SERF2P84101 59 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 C6orf15Q6UXA7 325 aaPredicted RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 APCDD1LQ8NCL9 501 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 DTD1Q8TEA8 209 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 MRGPRFQ96AM1 343 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 A0A1W2PR80 420 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 ZNF891A8MT65 544 aaPredicted RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 MYF5P13349 255 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 NDUFB7P17568 137 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 BTNL3Q6UXE8 466 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 DYNLRB1Q9NP97 96 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 PSG11Q9UQ72 335 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 OR2W1Q9Y3N9 320 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 NYNRINQ9P2P1 1898 aaKnown RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 SUCLG1P53597 346 aaKnown RBP12.2□□□□□ -0.46
SMC5-201ENST00000361138 HIKESHIQ53FT3 197 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 OR1K1Q8NGR3 316 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 ZNF721Q8TF20 911 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 SLX1AQ9BQ83 275 aa12.2□□□□□ -0.46
SMC5-201ENST00000361138 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 MOSPD3O75425 235 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 CD99P14209 185 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 SMAD4Q13485 552 aaKnown RBP12.19□□□□□ -0.46
SMC5-201ENST00000361138 ACSM6Q6P461 480 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 C9orf40Q8IXQ3 194 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 TMEM178AQ8NBL3 297 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
SMC5-201ENST00000361138 J3QRE1 110 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 SRSF10O75494 262 aaKnown RBP12.19□□□□□ -0.46
SMC5-201ENST00000361138 GAMTQ14353 236 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
SMC5-201ENST00000361138 OR10X1Q8NGY0 326 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 FER1L6-AS2Q96M78 137 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 TMEM222Q9H0R3 208 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 PAX5Q02548 391 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 GINS3Q9BRX5 216 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 TWSG1Q9GZX9 223 aa12.19□□□□□ -0.46
SMC5-201ENST00000361138 UBE2CO00762 179 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms