RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 TREM2Q9NZC2 230 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 MS4A18H0YCH9 400 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 IGHV3-13P01766 116 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 IGHV3-7P01780 117 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 PRSS12P56730 875 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 RELBQ01201 579 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 MS4A18Q3C1V0 323 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 NHLRC3Q5JS37 347 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 WDR25Q64LD2 544 aaPredicted RBP11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 ZNF841Q6ZN19 808 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 OR11G2Q8NGC1 345 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 WDR34Q96EX3 536 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 SH2D7A6NKC9 451 aaPredicted RBP11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 RECKO95980 971 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 CST9Q5W186 159 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 SLC26A1Q9H2B4 701 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 SAP30LQ9HAJ7 183 aa11.81□□□□□ -0.52
CCDC144A-203ENST00000360495 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 TRGC1P0CF51 173 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 HIST1H1BP16401 226 aaKnown RBP11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 CLDN18P56856 261 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 OR11H4Q8NGC9 324 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 ASB5Q8WWX0 329 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 AHDC1Q5TGY3 1603 aaPredicted RBP11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 IGLV3-16A0A075B6K0 115 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 MPLP40238 635 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 ZNF141Q15928 474 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 DNLZQ5SXM8 178 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 PERPQ96FX8 193 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 R3HDMLQ9H3Y0 253 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 CD74P04233 296 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 CD1BP29016 333 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 SERF2P84101 59 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 Q6ZNB5 142 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
CCDC144A-203ENST00000360495 ACP1P24666 158 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 PARM1Q6UWI2 310 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 KMT5CQ86Y97 462 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 KISS1RQ969F8 398 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 RPEQ96AT9 228 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 TMEM38BQ9NVV0 291 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 K7ESF4 209 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 CRYABP02511 175 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 EMP1P54849 157 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 FZD5Q13467 585 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 SLC36A1Q7Z2H8 476 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 C10orf111Q8N326 155 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 OR8B3Q8NGG8 313 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 MRPL13Q9BYD1 178 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 ZFP64Q9NPA5 681 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 ST6GALNAC2Q9UJ37 374 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 WIPI2Q9Y4P8 454 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 NDUFB4O95168 129 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 CBLN3Q6UW01 205 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 MRPS18AQ9NVS2 196 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 NPIPB9F8W1W9 429 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 HOGA1Q86XE5 327 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 OR4X1Q8NH49 305 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 PTPMT1Q8WUK0 201 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 ASB10Q8WXI3 467 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 IL19Q9UHD0 177 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 C5P01031 1676 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 TMEM265A0A087WTH1 108 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 H7C2G1 150 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 TNFRSF1AP19438 455 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 EIF3IQ13347 325 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 WIPI1Q5MNZ9 446 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 OIT3Q8WWZ8 545 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 GMPPAQ96IJ6 420 aaPredicted RBP11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
CCDC144A-203ENST00000360495 MEF2BQ02080 365 aaPredicted RBP11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 ZNF519Q8TB69 540 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 TOX2Q96NM4 488 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 PSG2P11465 335 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 OTX1P32242 354 aaPredicted RBP11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 BMI1P35226 326 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 CTAG1AP78358 180 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 MGAT2Q10469 447 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 TEPPQ6URK8 271 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 TUBD1Q9UJT1 453 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 PATE4P0C8F1 98 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 PMELP40967 661 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 Q5PR19 223 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 HES3Q5TGS1 186 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms