RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ETFBKMTQ8IXQ9 262 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 CLEC18BQ6UXF7 455 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 IL19Q9UHD0 177 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 ZXDAP98168 799 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 PRSS8Q16651 343 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 ATOH1Q92858 354 aaPredicted RBP8.24□□□□□ -1.09
VPS13A-203ENST00000360280 PSME4Q14997 1843 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 A8MWL6 223 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 DHHO43323 396 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 VDAC1P21796 283 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 HES3Q5TGS1 186 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 CTSDP07339 412 aaPredicted RBP8.24□□□□□ -1.09
VPS13A-203ENST00000360280 CCSMST1Q4G0I0 132 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 MED19A0JLT2 244 aaPredicted RBP8.24□□□□□ -1.09
VPS13A-203ENST00000360280 CDAP32320 146 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 GFRALQ6UXV0 394 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 SLC26A1Q9H2B4 701 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 ABLIM3O94929 683 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 PYCR3Q53H96 274 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 WDR13Q9H1Z4 485 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 THAP10Q9P2Z0 257 aaPredicted RBP8.24□□□□□ -1.09
VPS13A-203ENST00000360280 HSF4Q9ULV5 492 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 MMP25Q9NPA2 562 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 GPR27Q9NS67 375 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 UPK1AO00322 258 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 CKS2P33552 79 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 MFAP2P55001 183 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 SLC25A42Q86VD7 318 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 F2RL2O00254 374 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 SEC11BP0C7V7 166 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 RNF133Q8WVZ7 376 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 PRELID3AQ96N28 172 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 TBC1D29Q9UFV1 150 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 MYO7AQ13402 2215 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 SEC16AO15027 2179 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 A0A1B0GU03 582 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 KCNAB3O43448 404 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 FOLR2P14207 255 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 NUBPLQ8TB37 319 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 DYNLRB2Q8TF09 96 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 FOXB1Q99853 325 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 LTB4R2Q9NPC1 389 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 KIRREL2Q6UWL6 708 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 WDR34Q96EX3 536 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 TSPAN32Q96QS1 320 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 HCFC2Q9Y5Z7 792 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF236Q9UL36 1845 aa8.24□□□□□ -1.09
VPS13A-203ENST00000360280 MPDU1O75352 247 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 TNFAIP6P98066 277 aaPredicted RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CD74P04233 296 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 OPN4Q9UHM6 478 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 LINC01553A4QN01 128 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 ALG1L2C9J202 215 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CDS2O95674 445 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 LRP10Q7Z4F1 713 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 FBXL6Q8N531 539 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SGMS2Q8NHU3 365 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 OIT3Q8WWZ8 545 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 TM4SF19Q96DZ7 209 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 K7ESM1 405 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 HSPB9Q9BQS6 159 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CXorf65A6NEN9 183 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 GHRHP01286 108 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 RPS27P42677 84 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CCR5P51681 352 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 ARL6IP6Q8N6S5 226 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 NUDT16L1Q9BRJ7 211 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 TCRBV16S1A1N1A0A5B0 115 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SS18L1O75177 396 aaPredicted RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 POLR2GP62487 172 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 WDR38Q5JTN6 314 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 OR4X1Q8NH49 305 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 MRPL30Q8TCC3 161 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 DIDO1Q9BTC0 2240 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 A0A0B4J2E0 115 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 A0A1B0GX12 115 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CHST1O43916 411 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 RAC3P60763 192 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF385CQ66K41 422 aaPredicted RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 OR4C13Q8NGP0 309 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 AUP1Q9Y679 476 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 DAOP14920 347 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CDKN2AP42771 156 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 GPR3P46089 330 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 C12orf73Q69YU5 71 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 FBXO46Q6PJ61 603 aaPredicted RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 NFAM1Q8NET5 270 aaPredicted RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF665Q9H7R5 613 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 BCL2P10415 239 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SERF2P84101 59 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 AGERQ15109 404 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 ORAI1Q96D31 301 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms