RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ZNF2Q9BSG1 426 aaPredicted RBP19.38■□□□□ 0.69
SDF4-202ENST00000360001 OR51J1Q9H342 316 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 MBNL3Q9NUK0 354 aaKnown RBP19.38■□□□□ 0.69
SDF4-202ENST00000360001 TMEM106BQ9NUM4 274 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 TRAV39A0A0B4J263 110 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 TMEM30CPA0ZSE6 113 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 OR5H14A6NHG9 310 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 SOD3P08294 240 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 DANCRP0C864 163 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 MUC1P15941 1255 aaPredicted RBP19.37■□□□□ 0.69
SDF4-202ENST00000360001 CBX3Q13185 183 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 HERPUD1Q15011 391 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 METTL11BQ5VVY1 283 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 MOB1BQ7L9L4 216 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 DEFB108BQ8NET1 73 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 CCL17Q92583 94 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 MED30Q96HR3 178 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 ALX4Q9H161 411 aaPredicted RBP19.37■□□□□ 0.69
SDF4-202ENST00000360001 TRAPPC2LQ9UL33 140 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 CHD6Q8TD26 2715 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 A6NNC1 897 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 TRAPPC2P0DI81 140 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 TRAPPC2BP0DI82 140 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 HLA-DRB3P79483 266 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 PAX5Q02548 391 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 TMED4Q7Z7H5 227 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 C1orf87Q8N0U7 546 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 CAPSLQ8WWF8 208 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 SNX22Q96L94 193 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 TMPRSS13Q9BYE2 586 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 MYOZ1Q9NP98 299 aaPredicted RBP19.37■□□□□ 0.69
SDF4-202ENST00000360001 MAB21L2Q9Y586 359 aa19.37■□□□□ 0.69
SDF4-202ENST00000360001 RAI1Q7Z5J4 1906 aaPredicted RBP19.37■□□□□ 0.69
SDF4-202ENST00000360001 COL12A1Q99715 3063 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 IGKV1-6A0A0C4DH72 117 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 RRAS2P62070 204 aaPredicted RBP19.36■□□□□ 0.69
SDF4-202ENST00000360001 SRSF1Q07955 248 aaKnown RBP eCLIP19.36■□□□□ 0.69
SDF4-202ENST00000360001 PEG10Q86TG7 708 aaKnown RBP19.36■□□□□ 0.69
SDF4-202ENST00000360001 DTX2Q86UW9 622 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 DACT3Q96B18 629 aaPredicted RBP19.36■□□□□ 0.69
SDF4-202ENST00000360001 SDSLQ96GA7 329 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 KIF25Q9UIL4 384 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 GPR132Q9UNW8 380 aa19.36■□□□□ 0.69
SDF4-202ENST00000360001 KLF2Q9Y5W3 355 aaPredicted RBP19.36■□□□□ 0.69
SDF4-202ENST00000360001 SPTAN1Q13813 2472 aaKnown RBP19.36■□□□□ 0.69
SDF4-202ENST00000360001 IGHV1-69-2A0A0G2JMI3 117 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 FPR2P25090 351 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 AKAP14Q86UN6 197 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 ZNRF1Q8ND25 227 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 K7N7A8 449 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 LGALS8O00214 317 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 GYPAP02724 150 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 FCGR2CP31995 323 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 SEC61A1P61619 476 aaKnown RBP19.35■□□□□ 0.69
SDF4-202ENST00000360001 FBXO9Q9UK97 447 aaPredicted RBP19.35■□□□□ 0.69
SDF4-202ENST00000360001 RALYQ9UKM9 306 aaKnown RBP19.35■□□□□ 0.69
SDF4-202ENST00000360001 MGAT4AQ9UM21 535 aa19.35■□□□□ 0.69
SDF4-202ENST00000360001 GLIPR1P48060 266 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 KRBOX4Q5JUW0 171 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 ZNF788Q6ZQV5 615 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 SLC25A42Q86VD7 318 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 ZNF561Q8N587 486 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 OR52B4Q8NGK2 314 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 OR4A4PQ8NGN8 299 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 GAFA1Q96PS6 74 aa19.34■□□□□ 0.69
SDF4-202ENST00000360001 A0A1B0GW55 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 MGST3O14880 152 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 OR4E1P0C645 316 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L2P0CJ85 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L3P0CJ86 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L4P0CJ87 422 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L5P0CJ88 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L6P0CJ89 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L7P0CJ90 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 SELLP14151 372 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 GLP1RP43220 463 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 BAMBIQ13145 260 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 ZNF626Q68DY1 528 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4L9Q6RFH8 374 aaPredicted RBP19.33■□□□□ 0.69
SDF4-202ENST00000360001 ZNF554Q86TJ5 538 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 PPP1R35Q8TAP8 253 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 PPP1R14BQ96C90 147 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 TRAF4Q9BUZ4 470 aaPredicted RBP19.33■□□□□ 0.69
SDF4-202ENST00000360001 C5orf66Q9H5L9 145 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 GPN1Q9HCN4 374 aaPredicted RBP19.33■□□□□ 0.69
SDF4-202ENST00000360001 DUX4Q9UBX2 424 aa19.33■□□□□ 0.69
SDF4-202ENST00000360001 PPIAL4EA0A075B759 164 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 MEIKINA0A087WXM9 373 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 TRAV38-1A0A0B4J264 116 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 SNRPGP15A8MWD9 76 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 PPIAL4DF5H284 164 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 BET1O15155 118 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 TK1P04183 234 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 CTXN2P0C2S0 81 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 PPIAL4FP0DN26 164 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 NFYAP23511 347 aaPredicted RBP19.33■□□□□ 0.68
SDF4-202ENST00000360001 SURF2Q15527 256 aaPredicted RBP19.33■□□□□ 0.68
SDF4-202ENST00000360001 HMGN3Q15651 99 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 KIAA2026Q5HYC2 2103 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 TPRX1Q8N7U7 411 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms